3ZN5

VP16, a capsid protein of bacteriophage P23-77 (VP16-virus-derived)

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF22024	e3zn5A1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
B	PF22024	e3zn5B1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
C	PF22024	e3zn5C1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
D	PF22024	e3zn5D1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
E	PF22024	e3zn5E1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
F	PF22024	e3zn5F1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
G	PF22024	e3zn5G1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)
H	PF22024	e3zn5H1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22024	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
D	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
E	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
F	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
G	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
H	2.60.120.1180	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF22024	Major capsid protein VP16-like (VP16-like)	Major capsid protein VP16-like	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	VP16	identical protein binding protein binding binding	-	-

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.