3WGU
Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state without oligomycin
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth G] | d3wgug_ | Membrane and cell surface proteins and peptides | Single transmembrane helix | ATP1G1/PLM/MAT8-like (FXYD-like) | ATP1G1/PLM/MAT8-like (FXYD-like) | automated matches | (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
F [auth E] | d3wgue_ | Membrane and cell surface proteins and peptides | Single transmembrane helix | ATP1G1/PLM/MAT8-like (FXYD-like) | ATP1G1/PLM/MAT8-like (FXYD-like) | automated matches | (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00122 | e3wguA7 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: PF00122 | ECOD (1.6) |
A | PF00122,PF00689,PF00690 | e3wguA8 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Calcium ATPase transmembrane domain M | F: PF00122,PF00689,PF00690 | ECOD (1.6) |
A | PF13246 | e3wguA6 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: PF13246 | ECOD (1.6) |
A | PF00702 | e3wguA5 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: PF00702 | ECOD (1.6) |
D [auth C] | PF00122 | e3wguC7 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: PF00122 | ECOD (1.6) |
D [auth C] | PF00122,PF00689,PF00690 | e3wguC8 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Calcium ATPase transmembrane domain M | F: PF00122,PF00689,PF00690 | ECOD (1.6) |
D [auth C] | PF13246 | e3wguC6 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: PF13246 | ECOD (1.6) |
D [auth C] | PF00702 | e3wguC5 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: PF00702 | ECOD (1.6) |
B | PF00287 | e3wguB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00287 | ECOD (1.6) |
B | PF00287 | e3wguB2 | A: extended segments | X: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | H: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | T: Transmembrane helix in sodium-potassium ATPase beta subunit | F: PF00287 | ECOD (1.6) |
E [auth D] | PF00287 | e3wguD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00287 | ECOD (1.6) |
E [auth D] | PF00287 | e3wguD2 | A: extended segments | X: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | H: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | T: Transmembrane helix in sodium-potassium ATPase beta subunit | F: PF00287 | ECOD (1.6) |
C [auth G] | PF02038 | e3wguG1 | A: extended segments | X: FXYD family (From Topology) | H: FXYD family (From Topology) | T: FXYD family | F: PF02038 | ECOD (1.6) |
F [auth E] | PF02038 | e3wguE1 | A: extended segments | X: FXYD family (From Topology) | H: FXYD family (From Topology) | T: FXYD family | F: PF02038 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth C] | PF00689 | Cation transporting ATPase, C-terminus (Cation_ATPase_C) | Cation transporting ATPase, C-terminus | - | Family |
A, D [auth C] | PF00702 | haloacid dehalogenase-like hydrolase (Hydrolase) | haloacid dehalogenase-like hydrolase | This family is structurally different from the alpha/beta hydrolase family (Pfam:PF00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted fo ... | Domain |
A, D [auth C] | PF00690 | Cation transporter/ATPase, N-terminus (Cation_ATPase_N) | Cation transporter/ATPase, N-terminus | Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. | Domain |
A, D [auth C] | PF00122 | E1-E2 ATPase (E1-E2_ATPase) | E1-E2 ATPase | - | Family |
A, D [auth C] | PF13246 | Cation transport ATPase (P-type) (Cation_ATPase) | Cation transport ATPase (P-type) | - | Family |
B, E [auth D] | PF00287 | Sodium / potassium ATPase beta chain (Na_K-ATPase) | Sodium / potassium ATPase beta chain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | P-type ATPase (P-ATPase) | P-ATPase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | P-type ATPase | Na,K-ATPase with bound Na+ preceding the E1P state |