3WGH
Crystal structure of RSP in complex with beta-NADH
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3wgha1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Thermoanaerobacter ethanolicus JW 200 ) [TaxId: 509192 ], | SCOPe (2.08) |
A | d3wgha2 | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Thermoanaerobacter ethanolicus JW 200 ) [TaxId: 509192 ], | SCOPe (2.08) |
B | d3wghb1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Thermoanaerobacter ethanolicus JW 200 ) [TaxId: 509192 ], | SCOPe (2.08) |
B | d3wghb2 | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Thermoanaerobacter ethanolicus JW 200 ) [TaxId: 509192 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF06971 | e3wghA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF06971 | ECOD (1.6) |
A | PF02629 | e3wghA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF02629 | ECOD (1.6) |
B | PF06971 | e3wghB2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF06971 | ECOD (1.6) |
B | PF02629 | e3wghB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF02629 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06971 | Putative DNA-binding protein N-terminus (Put_DNA-bind_N) | Putative DNA-binding protein N-terminus | - | Family | |
PF02629 | CoA binding domain (CoA_binding) | CoA binding domain | This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR022876 | Redox-sensing transcriptional repressor Rex | Family | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR003781 | CoA-binding | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR009718 | Rex DNA-binding, C-terminal domain | Domain |