Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Aarchaeo_STT3_2nde3wakA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Ig-like domains in STT3 (From Topology)T: Ig-like domains in STT3F: archaeo_STT3_2ndECOD (1.6)
APMT_2e3wakA3 A: alpha bundlesX: STT3/PglB/AglB transmembrane domain (From Topology)H: STT3/PglB/AglB transmembrane domain (From Topology)T: STT3/PglB/AglB transmembrane domainF: PMT_2ECOD (1.6)
Aarchaeo_STT3_1ste3wakA1 A: a/b three-layered sandwichesX: STT3/PglB/AglB core domain (From Topology)H: STT3/PglB/AglB core domain (From Topology)T: STT3/PglB/AglB core domainF: archaeo_STT3_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.12610 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
A1.20.58.1650 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
A2.60.40.3390 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02516Oligosaccharyl transferase STT3, N-terminal (STT3)Oligosaccharyl transferase STT3, N-terminalThis entry consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity [2]. In eukaryotes, OTase transfers a l ...This entry consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity [2]. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER [2]. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines [3-4]. This entry represents the N-terminal domain, consisting of transmembrane helices.
Domain
PF18079Archaeal glycosylation protein B long peripheral domain (AglB_L1)Archaeal glycosylation protein B long peripheral domainThis domain is found in Archaeal Glycosylation B protein (AglB-Long) in A. fulgidus. When the domain, known as peripheral l (Pl), is combined with the central core (CC) and insertion (IS) sub-units, they form the C-terminal domain. It is thought that ...This domain is found in Archaeal Glycosylation B protein (AglB-Long) in A. fulgidus. When the domain, known as peripheral l (Pl), is combined with the central core (CC) and insertion (IS) sub-units, they form the C-terminal domain. It is thought that the C-terminal domain may contribute toward the increased thermal stability of the AglB proteins in the hyper-thermophilic [1].
Domain
PF22627AglB core domain (AglB_core-like)AglB core domainThis entry represents the C-terminal core domain of archaeal oligosaccharyltransferase AglB that transfers oligosaccharide chain from a lipid-linked oligosaccharide (LLO) donor to the asparagine residues in the N-glycosylation sequon, Asn-X-Ser/Thr ( ...This entry represents the C-terminal core domain of archaeal oligosaccharyltransferase AglB that transfers oligosaccharide chain from a lipid-linked oligosaccharide (LLO) donor to the asparagine residues in the N-glycosylation sequon, Asn-X-Ser/Thr (X=Pro) [1-5]. In the archaea AlgB, it occurs alone, rather than in complex as the eukaryotic homologue STT3. This domain adopts a mixed alpha/beta fold and contains a highly conserved WWDYG motif that may be of functional relevance.
Domain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage