3W6V | pdb_00003w6v

Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AJHDe3w6vA2 A: beta barrelsX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: JHDECOD (v294.2)
AtRNA-synt_1_2e3w6vA1 A: beta barrelsX: Lipocalins/StreptavidinH: RIFT-relatedT: acid proteaseF: tRNA-synt_1_2ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.60 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Homeodomain-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3')---
DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3')---
AdpA - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR029062Class I glutamine amidotransferase-likeHomologous Superfamily
IPR002818DJ-1/PfpIDomain
IPR009057Homedomain-like superfamilyHomologous Superfamily
IPR018060AraC-like, DNA binding HTH domainDomain
IPR052158Isonitrile Hydratase and Quaternary Amine RegulatorFamily