3VR4
Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | VatA barrel-sandwich hybrid domain-like | 8046304 | 4004012 | SCOP2 (2021-05-27) |
A | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8093378 | 4004011 | SCOP2 (2021-05-27) |
A | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8093376 | 4002275 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Single hybrid motif | 8093375 | 3001880 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | RecA-like P-loop NTPases | 8093379 | 3002019 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8093380 | 3000684 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8093377 | 3001034 | SCOP2 (2021-05-27) |
C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8093377 | 3001034 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8093380 | 3000684 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8093379 | 3002019 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Single hybrid motif | 8093375 | 3001880 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8093380 | 3000684 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8093377 | 3001034 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Single hybrid motif | 8093375 | 3001880 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8093379 | 3002019 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02874 | e3vr4A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
A | PF22919 | e3vr4A2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
A | PF00006,PF16886 | e3vr4A3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006,PF16886 | ECOD (1.6) |
C | PF02874 | e3vr4C1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
C | PF22919 | e3vr4C2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
C | PF00006,PF16886 | e3vr4C3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006,PF16886 | ECOD (1.6) |
B | PF02874 | e3vr4B3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
B | PF22919 | e3vr4B2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
B | PF00006,PF16886 | e3vr4B4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006,PF16886 | ECOD (1.6) |
E | PF02874 | e3vr4E6 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
E | PF22919 | e3vr4E5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
E | PF00006 | e3vr4E4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
F | PF02874 | e3vr4F6 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
F | PF22919 | e3vr4F5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
F | PF00006 | e3vr4F4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
D | PF02874 | e3vr4D6 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
D | PF22919 | e3vr4D5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
D | PF00006 | e3vr4D4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
H | PF01990 | e3vr4H1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: AtpF-like (From Topology) | T: AtpF-like | F: PF01990 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF16886 | ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn) | ATPsynthase alpha/beta subunit N-term extension | - | Family | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family | |
PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family |