3VLB
Crystal structure of xeg-edgp
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3vlba_ | All beta proteins | Acid proteases | Acid proteases | automated matches | automated matches | carrot (Daucus carota ) [TaxId: 4039 ], | SCOPe (2.08) |
C | d3vlbc_ | All beta proteins | Acid proteases | Acid proteases | automated matches | automated matches | carrot (Daucus carota ) [TaxId: 4039 ], | SCOPe (2.08) |
B | d3vlbb_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Aspergillus aculeatus ) [TaxId: 5053 ], | SCOPe (2.08) |
D | d3vlbd_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Aspergillus aculeatus ) [TaxId: 5053 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Pepsin-like | 8087229 | 4002301 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Acid proteases | 8087230 | 3001059 | SCOP2 (2021-05-27) |
C | SCOP2B Superfamily | Acid proteases | 8087230 | 3001059 | SCOP2B (2021-05-27) |
B | SCOP2 Family | Xylanase/endoglucanase 11/12 | 8061420 | 4002742 | SCOP2 (2021-05-27) |
B | SCOP2 Superfamily | Concanavalin A-like lectins/glucanases | 8061421 | 3000120 | SCOP2 (2021-05-27) |
D | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8061421 | 3000120 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14541 | e3vlbA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: PF14541 | ECOD (1.6) |
A | PF14543 | e3vlbA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: PF14543 | ECOD (1.6) |
C | PF14541 | e3vlbC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: PF14541 | ECOD (1.6) |
C | PF14543 | e3vlbC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: PF14543 | ECOD (1.6) |
B | PF01670 | e3vlbB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF01670 | ECOD (1.6) |
D | PF01670 | e3vlbD1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF01670 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
C | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
B | 2.60.120.180 | Mainly Beta | Sandwich | Jelly Rolls | Glycoside hydrolase family 11/12, catalytic domain | CATH (4.3.0) |
D | 2.60.120.180 | Mainly Beta | Sandwich | Jelly Rolls | Glycoside hydrolase family 11/12, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14541 | Xylanase inhibitor C-terminal (TAXi_C) | Xylanase inhibitor C-terminal | This domain is found C-terminal in some aspartic proteinases and in xylanase inhibitors. The activity of these proteins is vital for plant-survival as xylanase produced by phytopathogens destroys plant cells. In TAXI-type inhibitors, this domain is i ... | Domain | |
PF14543 | Xylanase inhibitor N-terminal (TAXi_N) | Xylanase inhibitor N-terminal | This domain is found N-terminal in some aspartic proteinases and in xylanase inhibitors. The activity of these proteins is vital for plant-survival as xylanase produced by phytopathogens destroys plant cells [1-3]. | Domain | |
PF01670 | Glycosyl hydrolase family 12 (Glyco_hydro_12) | Glycosyl hydrolase family 12 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032861 | Xylanase inhibitor, N-terminal | Domain | |
IPR033121 | Peptidase family A1 domain | Domain | |
IPR001461 | Aspartic peptidase A1 family | Family | |
IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily | |
IPR032799 | Xylanase inhibitor, C-terminal | Domain | |
IPR033868 | Xylanase inhibitor I-like | Domain | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR013319 | Glycoside hydrolase family 11/12 | Homologous Superfamily | |
IPR002594 | Glycoside hydrolase family 12 | Family |