3VCD
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group R32
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | BMC | e3vcdA1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
B | BMC | e3vcdB1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
C | BMC | e3vcdC1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
D | BMC | e3vcdD1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
E | BMC | e3vcdE1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
F | BMC | e3vcdF1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
G | BMC | e3vcdG1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
H | BMC | e3vcdH1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
B | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
C | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
D | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
E | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
F | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
G | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
H | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00936 | BMC domain (BMC) | BMC domain | Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011238 | Bacterial microcompartment shell protein PduT | Family | |
IPR000249 | Bacterial microcompartment domain | Domain | |
IPR050575 | Bacterial microcompartment shell | Family | |
IPR044872 | CcmK/CsoS1, bacterial microcompartment domain | Domain | |
IPR037233 | CcmK-like superfamily | Homologous Superfamily |