3U8P
Cytochrome b562 integral fusion with EGFP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | GFP-like | 8096046 | 3000576 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cytochromes | 8057879 | 3001526 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GFP-like | 8096046 | 3000576 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cytochromes | 8057879 | 3001526 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cytochromes | 8057879 | 3001526 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GFP-like | 8096046 | 3000576 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01353 | e3u8pA1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
A | PF07361 | e3u8pA2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Cytochromes (From Topology) | T: Cytochromes | F: PF07361 | ECOD (1.6) |
B | PF01353 | e3u8pB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
B | PF07361 | e3u8pB2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Cytochromes (From Topology) | T: Cytochromes | F: PF07361 | ECOD (1.6) |
C | PF01353 | e3u8pC1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
C | PF07361 | e3u8pC2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Cytochromes (From Topology) | T: Cytochromes | F: PF07361 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
A | 1.20.120.10 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Cytochrome c/b562 | CATH (4.3.0) |
B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
B | 1.20.120.10 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Cytochrome c/b562 | CATH (4.3.0) |
C | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
C | 1.20.120.10 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Cytochrome c/b562 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07361 | Cytochrome b562 (Cytochrom_B562) | Cytochrome b562 | - | Family | |
PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Cytochrome b562 integral fusion with enhanced green fluorescent protein |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000786 | Green fluorescent protein, GFP | Family | |
IPR011584 | Green fluorescent protein-related | Family | |
IPR009017 | Green fluorescent protein | Homologous Superfamily | |
IPR010980 | Cytochrome c/b562 | Homologous Superfamily | |
IPR009155 | Cytochrome b562 | Family |