3TKQ
Crystal structure of full-length human peroxiredoxin 4 with mixed conformation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3tkqb_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Glutathione peroxidase-like | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
E | d3tkqe_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Glutathione peroxidase-like | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d3tkqa_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Glutathione peroxidase-like | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d3tkqc_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Glutathione peroxidase-like | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d3tkqd_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Glutathione peroxidase-like | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | AhpC-TSA_1 | e3tkqB1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
E | AhpC-TSA_1 | e3tkqE1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
A | AhpC-TSA_1 | e3tkqA1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
C | AhpC-TSA_1 | e3tkqC1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
D | AhpC-TSA_1 | e3tkqD1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
E | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
D | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00578 | AhpC/TSA family (AhpC-TSA) | AhpC/TSA family | This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA). | Domain | |
PF10417 | C-terminal domain of 1-Cys peroxiredoxin (1-cysPrx_C) | C-terminal domain of 1-Cys peroxiredoxin | This is the C-terminal domain of 1-Cys peroxiredoxin (1-cysPrx), a member of the peroxiredoxin superfamily which protect cells against membrane oxidation through glutathione (GSH)-dependent reduction of phospholipid hydroperoxides to corresponding al ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019479 | Peroxiredoxin, C-terminal | Domain | |
IPR050217 | Thiol-specific antioxidant peroxiredoxin | Family | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily | |
IPR000866 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | Domain |