3TKN
Structure of the Nup82-Nup159-Nup98 heterotrimer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | ZU5 domain-like | 8099832 | 3002026 | SCOP2B (2022-06-29) |
F | SCOP2 Family | Nup98 autoproteolytic domain-like | 8099831 | 4007737 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | ZU5 domain-like | 8099832 | 3002026 | SCOP2 (2022-06-29) |
I | SCOP2B Superfamily | ZU5 domain-like | 8099832 | 3002026 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G | ANAPC4_WD40_9 | e3tknG1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
A | ANAPC4_WD40_9 | e3tknA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
D | ANAPC4_WD40_9 | e3tknD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
C | Nucleoporin2 | e3tknC1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: Nucleoporin2 | ECOD (1.6) |
F | Nucleoporin2 | e3tknF1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: Nucleoporin2 | ECOD (1.6) |
I | Nucleoporin2 | e3tknI1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: Nucleoporin2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
F | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
I | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04096 | Nucleoporin autopeptidase (Nucleoporin2) | Nucleoporin autopeptidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037700 | Nucleoporin NUP88/NUP82 | Family | |
IPR039462 | Nucleoporin Nup159/Nup146, N-terminal | Domain | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR037665 | Nucleoporin peptidase S59-like | Family | |
IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily | |
IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain | |
IPR021967 | Nuclear pore complex protein NUP96, C-terminal domain | Domain |