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 3TDS | pdb_00003tds

Crystal structure of HSC F194I

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth D]14-3-3e3tdsD1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)
D [auth C]14-3-3e3tdsC1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)
C [auth B]14-3-3e3tdsB1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)
B [auth A]14-3-3e3tdsA1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)
A [auth E]14-3-3e3tdsE1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E [auth D]1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)
D [auth C]1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)
C [auth B]1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)
B [auth A]1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)
A [auth E]1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth E],
B [auth A],
C [auth B],
D [auth C],
E [auth D]		PF01226Formate/nitrite transporter (Form_Nir_trans)Formate/nitrite transporterProteins in this entry belong to the Formate-Nitrite Transporter (FNT) family and includes the nitrite transport protein NirC and formate channel FocA [1,2]. They have a pentameric architecture with structural similarity to aquaporins and glyceropori ...Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family and includes the nitrite transport protein NirC and formate channel FocA [1,2]. They have a pentameric architecture with structural similarity to aquaporins and glyceroporins, comprising a right-handed bundle of 6 transmembrane (TM) alpha-helices [1]. Proteins in this family transport the structurally related compounds, formate and nitrite.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth E],
B [auth A],
C [auth B],
D [auth C],
E [auth D]		formate/nitrite transporter -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth E],
B [auth A],
C [auth B],
D [auth C],
E [auth D]		IPR023271Aquaporin-likeHomologous Superfamily
A [auth E],
B [auth A],
C [auth B],
D [auth C],
E [auth D]		IPR024002Formate/nitrite transporter, conserved siteConserved Site
A [auth E],
B [auth A],
C [auth B],
D [auth C],
E [auth D]		IPR000292Formate/nitrite transporterFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicMajor Intrinsic Protein (MIP)/FNT superfamilyFormate/Nitrite transporter (FNT) family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALChannels : Formate/Nitrite Transporter (FNT) FamilyFNT3 Hydrosulphide Channel (HSC), pH 9.0