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 3T9G | pdb_00003t9g

The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyPectin lyase-like 8089108 3001746 SCOP2B (2022-06-29)
ASCOP2 FamilyPectate lyase-like 8089107 4002788 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPectin lyase-like 8089108 3001746 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFtsJe3t9gB1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: FtsJECOD (v295.2)
ARVPe3t9gA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)
A2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Pectate lyase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR0104963-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domainDomain
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR004898Pectate lyase PlyH/PlyE-likeFamily
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily