3SPL
Crystal structure of aprataxin ortholog Hnt3 in complex with DNA and AMP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089894 | 3001077 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | HIT-like | 8089896 | 3000223 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | HIT-like | 8089896 | 3000223 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089894 | 3001077 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089894 | 3001077 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | HIT-like | 8089896 | 3000223 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089894 | 3001077 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | HIT-like | 8089896 | 3000223 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01230 | e3splA1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF01230 | ECOD (1.6) |
A | PF16278 | e3splA2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF16278 | ECOD (1.6) |
D | PF01230 | e3splD1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF01230 | ECOD (1.6) |
D | PF16278 | e3splD2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF16278 | ECOD (1.6) |
B | PF01230 | e3splB1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF01230 | ECOD (1.6) |
B | PF16278 | e3splB2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF16278 | ECOD (1.6) |
C | PF01230 | e3splC1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF01230 | ECOD (1.6) |
C | PF16278 | e3splC2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: PF16278 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
D | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
B | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
C | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01230 | HIT domain (HIT) | HIT domain | - | Domain | |
PF16278 | C2HE / C2H2 / C2HC zinc-binding finger (zf-C2HE) | C2HE / C2H2 / C2HC zinc-binding finger | zf-C2HE is an unusual zinc-binding domain found in fungi, plants and metazoa. It is often found at the C-terminus of HIT-domain-containing proteins, Pfam:PF01230. In fungi the fourth ligand is a Glu, in plants it is Cys and in metazoans it is usually ... | Domain | |