3S48
Human Alpha-Haemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3s48a_ | All beta proteins | Immunoglobulin-like beta-sandwich | NEAT domain-like | NEAT domain | automated matches | (Staphylococcus aureus subsp. aureus MSSA476 ) [TaxId: 282459 ], | SCOPe (2.08) |
C [auth B] | d3s48b_ | All beta proteins | Immunoglobulin-like beta-sandwich | NEAT domain-like | NEAT domain | automated matches | (Staphylococcus aureus subsp. aureus MSSA476 ) [TaxId: 282459 ], | SCOPe (2.08) |
B [auth D] | d3s48d_ | All alpha proteins | Globin-like | Globin-like | Globins | Hemoglobin, alpha-chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth C] | d3s48c_ | All alpha proteins | Globin-like | Globin-like | Globins | Hemoglobin, alpha-chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | NEAT domain-like | 8055391 | 3002054 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | NEAT domain-like | 8055391 | 3002054 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | Globin-like | 8039836 | 3000554 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Globin-like | 8039836 | 3000554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | NEAT | e3s48A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
C [auth B] | NEAT | e3s48B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
B [auth D] | Globin | e3s48D1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
D [auth C] | Globin | e3s48C2 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C [auth B] | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B [auth D] | 1.10.490.10 | Mainly Alpha | Orthogonal Bundle | Globin-like | Globins | CATH (4.3.0) |
D [auth C] | 1.10.490.10 | Mainly Alpha | Orthogonal Bundle | Globin-like | Globins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF05031 | Iron Transport-associated domain (NEAT) | Iron Transport-associated domain | NEAT domains are heme and/or hemoprotein-binding modules highly conserved in secondary structure [1]. They have roles in hemoprotein binding, heme extraction and heme transfer [2] | Domain |
B [auth D], D [auth C] | PF00042 | Globin (Globin) | Globin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR005877 | YSIRK Gram-positive signal peptide | Domain |
A, C [auth B] | IPR050436 | Iron-regulated surface determinant protein A | Family |
A, C [auth B] | IPR006635 | NEAT domain | Domain |
A, C [auth B] | IPR019930 | Iron-regulated surface determinant protein H | Family |
A, C [auth B] | IPR048652 | Iron-regulated surface determinant protein H/B, linker domain | Domain |
A, C [auth B] | IPR037250 | NEAT domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR019931 | LPXTG cell wall anchor domain | Domain |
B [auth D], D [auth C] | IPR002338 | Hemoglobin, alpha-type | Family |
B [auth D], D [auth C] | IPR002339 | Hemoglobin, pi | Family |
B [auth D], D [auth C] | IPR009050 | Globin-like superfamily | Homologous Superfamily |
B [auth D], D [auth C] | IPR012292 | Globin/Protoglobin | Homologous Superfamily |
B [auth D], D [auth C] | IPR000971 | Globin | Domain |
B [auth D], D [auth C] | IPR050056 | Hemoglobin and related oxygen transporters | Family |