3RV1
Crystal structure of the N-terminal and RNase III domains of K. polysporus Dcr1 E224Q mutant
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribonucleas_3_3 | e3rv1A1 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: Ribonucleas_3_3 | ECOD (1.6) |
A | EUF08013 | e3rv1A2 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: EUF08013 | ECOD (1.6) |
B | Ribonucleas_3_3 | e3rv1B1 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: Ribonucleas_3_3 | ECOD (1.6) |
B | EUF08013 | e3rv1B2 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: EUF08013 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1270.260 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
A | 1.10.1520.10 | Mainly Alpha | Orthogonal Bundle | Ribonuclease iii, N-terminal Endonuclease Domain | Chain A | CATH (4.3.0) |
B | 1.20.1270.260 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
B | 1.10.1520.10 | Mainly Alpha | Orthogonal Bundle | Ribonuclease iii, N-terminal Endonuclease Domain | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20860 | Dicers, N-terminal domain (Dicers_N) | Dicers, N-terminal domain | This domain is found at the N-terminal of hypothetical proteins from yeast that are thought to be the noncanonical Dicers found in these organisms. These proteins adopt a homodimer assembly similar to bacterial ribonuclease III but extended by a uniq ... | Domain | |
PF00636 | Ribonuclease III domain (Ribonuclease_3) | Ribonuclease III domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048505 | Dicers-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR048504 | Dicers-like, N-terminal domain | Domain | |
IPR000999 | Ribonuclease III domain | Domain | |
IPR014720 | Double-stranded RNA-binding domain | Domain | |
IPR036389 | Ribonuclease III, endonuclease domain superfamily | Homologous Superfamily |