3RF3
Shigella IpaA-VBS3 in complex with human vinculin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3rf3b1 | All alpha proteins | Four-helical up-and-down bundle | alpha-catenin/vinculin-like | alpha-catenin/vinculin | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d3rf3a1 | All alpha proteins | Four-helical up-and-down bundle | alpha-catenin/vinculin-like | alpha-catenin/vinculin | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | alpha-Catenin/Vinculin-like | 8039803 | 3001619 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | alpha-Catenin/Vinculin-like | 8039802 | 3001619 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | alpha-Catenin/Vinculin-like | 8039802 | 3001619 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | alpha-Catenin/Vinculin-like | 8039803 | 3001619 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Vinculin_1st | e3rf3B5 | A: alpha bundles | X: Four-helical up-and-down bundle | H: alpha-catenin-related | T: alpha-catenin/vinculin | F: Vinculin_1st | ECOD (1.6) |
A | Vinculin_1st | e3rf3A5 | A: alpha bundles | X: Four-helical up-and-down bundle | H: alpha-catenin-related | T: alpha-catenin/vinculin | F: Vinculin_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.120.230 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Alpha-catenin/vinculin-like | CATH (4.3.0) |
A | 1.20.120.230 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Alpha-catenin/vinculin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01044 | Vinculin family (Vinculin) | Vinculin family | - | Family | |
PF17985 | SipA vinculin binding site (SipA_VBS) | SipA vinculin binding site | - | Motif |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017997 | Vinculin | Family | |
IPR036723 | Alpha-catenin/vinculin-like superfamily | Homologous Superfamily | |
IPR006077 | Vinculin/alpha-catenin | Family | |
IPR000633 | Vinculin, conserved site | Conserved Site | |
IPR015138 | Salmonella invasion protein A, N-terminal | Domain | |
IPR023225 | Salmonella invasion protein A, chaperone-binding | Homologous Superfamily | |
IPR040658 | SipA, vinculin binding site | Conserved Site |