3RDK
Protein crystal structure of xylanase A1 of Paenibacillus sp. JDR-2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3rdkb1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Paenibacillus sp. JDR-2 ) [TaxId: 324057 ], | SCOPe (2.08) |
B | d3rdkb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Paenibacillus sp. JDR-2 ) [TaxId: 324057 ], | SCOPe (2.08) |
A | d3rdka_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Paenibacillus sp. JDR-2 ) [TaxId: 324057 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Glyco_hydro_10 | e3rdkB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_10 | ECOD (1.6) |
A | Glyco_hydro_10 | e3rdkA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_10 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00331 | Glycosyl hydrolase family 10 (Glyco_hydro_10) | Glycosyl hydrolase family 10 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010502 | Carbohydrate-binding domain, family 9 | Domain | |
IPR003305 | Carbohydrate-binding, CenC-like | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR031158 | Glycosyl hydrolases family 10, active site | Active Site | |
IPR001119 | S-layer homology domain | Domain | |
IPR044846 | Glycoside hydrolase family 10 | Family | |
IPR001000 | Glycoside hydrolase family 10 domain | Domain |