3QWN | pdb_00003qwn

Crystal structure of a NigD-like immunity protein (BACCAC_03262) from Bacteroides caccae ATCC 43185 at 2.42 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2 Family	CTD of NigD-like	8046949	4005383	SCOP2 (2022-06-29)
H	SCOP2 Family	NTD of NigD-like	8047775	4005812	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	CTD of NigD-like	8052333	3002106	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	Bacterial enterotoxins	8052332	3000434	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Sulfotransfer_3	e3qwnB1	A: beta barrels	X: Long alpha-hairpin	H: C-terminal UvrC-binding domain of UvrB	T: C-terminal UvrC-binding domain of UvrB	F: Sulfotransfer_3	ECOD (v294.2)
D	Cupin_7	e3qwnD3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
E	RimK	e3qwnE3	A: beta barrels	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: RimK	ECOD (v294.2)
F	Cupin_7	e3qwnF3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
G	Sulfotransfer_3	e3qwnG1	A: beta barrels	X: Long alpha-hairpin	H: C-terminal UvrC-binding domain of UvrB	T: C-terminal UvrC-binding domain of UvrB	F: Sulfotransfer_3	ECOD (v294.2)
I	Cupin_7	e3qwnI3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
J	Sulfotransfer_3	e3qwnJ1	A: beta barrels	X: Long alpha-hairpin	H: C-terminal UvrC-binding domain of UvrB	T: C-terminal UvrC-binding domain of UvrB	F: Sulfotransfer_3	ECOD (v294.2)
K	Cupin_7	e3qwnK3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
L	Cupin_7	e3qwnL3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
H	Sulfotransfer_3	e3qwnH1	A: beta barrels	X: Long alpha-hairpin	H: C-terminal UvrC-binding domain of UvrB	T: C-terminal UvrC-binding domain of UvrB	F: Sulfotransfer_3	ECOD (v294.2)
C	Cupin_7	e3qwnC3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)
A	Cupin_7	e3qwnA3	A: beta barrels	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Cupin_7	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
B	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
D	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
D	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
E	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
E	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
F	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
F	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
G	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
G	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
I	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
I	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
J	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
J	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
K	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
K	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
L	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
L	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
H	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
H	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
C	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
C	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)
A	2.40.50.500	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	NigD-like N-terminal OB domain	CATH (4.3.0)
A	2.60.40.2370	Mainly Beta	Sandwich	Immunoglobulin-like	NigD-like, C-terminal beta sandwich domain	CATH (4.3.0)

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.