3QP8
Crystal structure of CviR (Chromobacterium violaceum 12472) ligand-binding domain bound to C10-HSL
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Autoind_bind | e3qp8C1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
D | Autoind_bind | e3qp8D1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
A | Autoind_bind | e3qp8A1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
B | Autoind_bind | e3qp8B1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (4.3.0) |
D | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (4.3.0) |
A | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (4.3.0) |
B | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03472 | Autoinducer binding domain (Autoind_bind) | Autoinducer binding domain | This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000792 | Transcription regulator LuxR, C-terminal | Domain | |
IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | Homologous Superfamily | |
IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | Domain |