3QC5
GspB
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | DUF4625_like | e3qc5X2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF4625_like | ECOD (1.6) |
A [auth X] | EUF07758 | e3qc5X3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: EUF07758 | ECOD (1.6) |
A [auth X] | Rib | e3qc5X1 | A: a+b two layers | X: a+b domain in platelet binding protein GspB (From Topology) | H: a+b domain in platelet binding protein GspB (From Topology) | T: a+b domain in platelet binding protein GspB | F: Rib | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 2.60.40.3260 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A [auth X] | 2.60.40.4140 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A [auth X] | 3.10.20.890 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF18938 | Atypical Rib domain (aRib) | Atypical Rib domain | This entry contains atypical Rib (aRib) domains. These are found in a variety of bacterial cell surface proteins. These proteins share a conserved motif with the Rib domain (YPDXXD). The structure of the aRib domain has been solved from two proteins ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth X] | Platelet binding protein GspB | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR026465 | Serine-rich repeat adhesion glycoprotein, N-terminal domain | Domain |
A [auth X] | IPR022263 | KxYKxGKxW signal peptide | Conserved Site |
A [auth X] | IPR044024 | Atypical Rib domain | Domain |
A [auth X] | IPR052293 | Serine-Rich Repeat Protein (SRRP) | Family |
A [auth X] | IPR019931 | LPXTG cell wall anchor domain | Domain |