3PJP
A Tandem SH2 Domain in Transcription Elongation Factor Spt6 Binds the Phosphorylated RNA Polymerase II C-terminal Repeat Domain(CTD)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SH2_2_N | e3pjpA3 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2_2_N | ECOD (1.6) |
B | SH2_2_N | e3pjpB1 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2_2_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.505.10 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | SH2 domain | CATH (4.3.0) |
B | 3.30.505.10 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | SH2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14633 | SH2 domain (SH2_2) | SH2 domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042066 | Spt6, Death-like domain | Homologous Superfamily | |
IPR028231 | Transcription elongation factor Spt6, YqgF domain | Domain | |
IPR037027 | YqgF/RNase H-like domain superfamily | Homologous Superfamily | |
IPR036860 | SH2 domain superfamily | Homologous Superfamily | |
IPR000980 | SH2 domain | Domain | |
IPR006641 | YqgF/RNase H-like domain | Domain | |
IPR010994 | RuvA domain 2-like | Homologous Superfamily | |
IPR023319 | Tex-like protein, HTH domain superfamily | Homologous Superfamily | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR017072 | Transcription elongation factor Spt6 | Family | |
IPR035420 | Spt6, SH2 domain | Domain | |
IPR032706 | Transcription elongation factor Spt6, helix-hairpin-helix motif | Domain | |
IPR049540 | Spt6-like, S1/OB domain | Domain | |
IPR023323 | Tex-like domain superfamily | Homologous Superfamily | |
IPR028088 | Helix-turn-helix DNA-binding domain of Spt6 | Domain | |
IPR035019 | Spt6, SH2 domain, N terminus | Domain | |
IPR035018 | Spt6, SH2 domain, C terminus | Domain | |
IPR028083 | Spt6 acidic, N-terminal domain | Domain |