3P7Z
Crystal structure of the Neurofibromin Sec14-PH module containing the patient derived mutation I1584V
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PH domain-like | 8057934 | 3000134 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CRAL/TRIO domain | 8057933 | 3001058 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CRAL/TRIO domain | 8057933 | 3001058 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PH domain-like | 8057934 | 3000134 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21877 | e3p7zA1 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: PF21877 | ECOD (1.6) |
A | PF13716 | e3p7zA2 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF13716 | ECOD (1.6) |
B | PF21877 | e3p7zB1 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: PF21877 | ECOD (1.6) |
B | PF13716 | e3p7zB2 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF13716 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
B | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
B | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13716 | Divergent CRAL/TRIO domain (CRAL_TRIO_2) | Divergent CRAL/TRIO domain | This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues [1]. | Domain | |
PF21877 | PH domain-like (PH_NF1) | PH domain-like | This entry represents the NF1 PH domain, a pleckstrin homology (PH)-like domain of potentially novel function discovered within the neurofibromin protein. Neurofibromin is a Ras-specific GTPase-activating protein (RasGAP) encoded by the NF1 gene, mut ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001251 | CRAL-TRIO lipid binding domain | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR039360 | Ras GTPase-activating protein | Family | |
IPR036865 | CRAL-TRIO lipid binding domain superfamily | Homologous Superfamily | |
IPR008936 | Rho GTPase activation protein | Homologous Superfamily | |
IPR023152 | Ras GTPase-activating protein, conserved site | Conserved Site | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR001936 | Ras GTPase-activating domain | Domain |