3P6Z | pdb_00003p6z

Structural basis of thrombin mediated factor V activation: essential role of the hirudin-like sequence Glu666-Glu672 for processing at the heavy chain-B domain junction

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth H]SCOP2B SuperfamilyTrypsin-like serine proteases 8042154 3000114 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTrypsin-like serine proteases 8042154 3000114 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E [auth H]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
B2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
E [auth H]		PF00089Trypsin (Trypsin)TrypsinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C,
F [auth I]		Coagulation factor V
B,
E [auth H]		Thrombin heavy chain
A,
D [auth G]		Thrombin light chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C,
F [auth I]		IPR033138Multicopper oxidases, conserved siteConserved Site
C,
F [auth I]		IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
C,
F [auth I]		IPR011707Multicopper oxidase-like, N-terminalDomain
C,
F [auth I]		IPR024715Coagulation factor 5/8-likeFamily
C,
F [auth I]		IPR000421Coagulation factor 5/8, C-terminal domainDomain
C,
F [auth I]		IPR008972CupredoxinHomologous Superfamily
C,
F [auth I]		IPR050633Neuropilin/Multicopper Oxidase/Coagulation FactorFamily
B,
E [auth H]		IPR018992Thrombin light chainDomain
B,
E [auth H]		IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
B,
E [auth H]		IPR003966Prothrombin/thrombinFamily
B,
E [auth H]		IPR018114Serine proteases, trypsin family, histidine active siteActive Site
B,
E [auth H]		IPR009003Peptidase S1, PA clanHomologous Superfamily
B,
E [auth H]		IPR033116Serine proteases, trypsin family, serine active siteActive Site
B,
E [auth H]		IPR001254Serine proteases, trypsin domainDomain
B,
E [auth H]		IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
B,
E [auth H]		IPR000001KringleDomain
B,
E [auth H]		IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
B,
E [auth H]		IPR051659Serine Protease S1 Domain-Containing ProteinFamily
B,
E [auth H]		IPR018056Kringle, conserved siteConserved Site
B,
E [auth H]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
B,
E [auth H]		IPR013806Kringle-like foldHomologous Superfamily
B,
E [auth H]		IPR038178Kringle superfamilyHomologous Superfamily
B,
E [auth H]		IPR001314Peptidase S1A, chymotrypsin familyFamily
A,
D [auth G]		IPR018992Thrombin light chainDomain
A,
D [auth G]		IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
A,
D [auth G]		IPR003966Prothrombin/thrombinFamily
A,
D [auth G]		IPR018114Serine proteases, trypsin family, histidine active siteActive Site
A,
D [auth G]		IPR009003Peptidase S1, PA clanHomologous Superfamily
A,
D [auth G]		IPR033116Serine proteases, trypsin family, serine active siteActive Site
A,
D [auth G]		IPR001254Serine proteases, trypsin domainDomain
A,
D [auth G]		IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
A,
D [auth G]		IPR000001KringleDomain
A,
D [auth G]		IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
A,
D [auth G]		IPR051659Serine Protease S1 Domain-Containing ProteinFamily
A,
D [auth G]		IPR018056Kringle, conserved siteConserved Site
A,
D [auth G]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A,
D [auth G]		IPR013806Kringle-like foldHomologous Superfamily
A,
D [auth G]		IPR038178Kringle superfamilyHomologous Superfamily
A,
D [auth G]		IPR001314Peptidase S1A, chymotrypsin familyFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C,
F [auth I]		:  P12259
B,
E [auth H]		:  P00734
A,
D [auth G]		:  P00734