3P38
Crystal structure of the NS1 effector domain W182A mutant from influenza A/Vietnam/1203/2004 (H5N1) virus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3p38a_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus (A/environment/Viet Nam/1203/2004(H5N1)) ) [TaxId: 680789 ], | SCOPe (2.08) |
B | d3p38b_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus (A/environment/Viet Nam/1203/2004(H5N1)) ) [TaxId: 680789 ], | SCOPe (2.08) |
C | d3p38c_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus (A/environment/Viet Nam/1203/2004(H5N1)) ) [TaxId: 680789 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ns1 effector domain-like | 8086494 | 3000759 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ns1 effector domain-like | 8086494 | 3000759 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ns1 effector domain-like | 8086494 | 3000759 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flu_NS1_C | e3p38A1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
B | Flu_NS1_C | e3p38B1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
C | Flu_NS1_C | e3p38C1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
B | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
C | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily | |
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR000256 | Influenza A virus NS1 protein | Family | |
IPR004208 | Influenza non-structural protein (NS1) | Family |