3P0B
Thermus thermophilus family GH57 branching enzyme: crystal structure, mechanism of action and products formed
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3p0ba2 | All alpha proteins | immunoglobulin/albumin-binding domain-like | Families 57/38 glycoside transferase middle domain | automated matches | automated matches | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
A | d3p0ba1 | Alpha and beta proteins (a/b) | 7-stranded beta/alpha barrel | Glycoside hydrolase/deacetylase | AmyC N-terminal domain-like | automated matches | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
A | d3p0ba3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF1957 | e3p0bA1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Families 57/38 glycoside transferase middle domain (From Topology) | T: Families 57/38 glycoside transferase middle domain | F: DUF1957 | ECOD (1.6) |
A | Glyco_hydro_57_1st | e3p0bA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase (From Topology) | T: Glycoside hydrolase/deacetylase | F: Glyco_hydro_57_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.110.10 | Alpha Beta | Alpha-Beta Barrel | 7-stranded beta/alpha barrel | Glycoside hydrolase 38, N terminal domain | CATH (4.3.0) |
A | 1.20.1430.10 | Mainly Alpha | Up-down Bundle | immunoglobulin/albumin-binding domain-like | Families 57/38 glycoside transferase, middle domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03065 | Glycosyl hydrolase family 57 (Glyco_hydro_57) | Glycosyl hydrolase family 57 | This family includes alpha-amylase (EC:3.2.1.1), 4--glucanotransferase (EC:2.4.1.-) and amylopullulanase enzymes. | Domain | |
PF09210 | 1,4-alpha-glucan branching enzyme, C-terminal (BE_C) | 1,4-alpha-glucan branching enzyme, C-terminal | This entry represents the C-terminal domain found in bacterial 1,4-alpha-glucan branching enzymes, such as TTHA1902 from Thermus thermophilus and TK1436 from Thermococcus kodakarensis, which belong to the glycoside hydrolase family 57 (GH57). These e ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037090 | Glycoside hydrolase families 57, central domain | Homologous Superfamily | |
IPR040042 | 1,4-alpha-glucan branching enzyme MT3115-like | Family | |
IPR028995 | Glycoside hydrolase families 57/38, central domain superfamily | Homologous Superfamily | |
IPR004300 | Glycoside hydrolase family 57, N-terminal domain | Domain | |
IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel | Homologous Superfamily | |
IPR015293 | 1,4-alpha-glucan branching enzyme, C-terminal | Domain | |
IPR027291 | Glycoside hydrolase 38, N-terminal domain superfamily | Homologous Superfamily | |
IPR048145 | 1,4-alpha-glucan branching enzyme TTHA1902 | Family |