3OWT
Crystal structure of S. cerevisiae RAP1-Sir3 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Rap1_C | e3owtB3 | A: alpha arrays | X: Rap1 C-terminal domain (From Topology) | H: Rap1 C-terminal domain (From Topology) | T: Rap1 C-terminal domain | F: Rap1_C | ECOD (1.6) |
B | rap1_RCT | e3owtB4 | A: alpha arrays | X: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | H: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | T: Repressor activator protein 1 (RAP1) helical bundle domain | F: rap1_RCT | ECOD (1.6) |
A | Rap1_C | e3owtA3 | A: alpha arrays | X: Rap1 C-terminal domain (From Topology) | H: Rap1 C-terminal domain (From Topology) | T: Rap1 C-terminal domain | F: Rap1_C | ECOD (1.6) |
A | rap1_RCT | e3owtA4 | A: alpha arrays | X: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | H: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | T: Repressor activator protein 1 (RAP1) helical bundle domain | F: rap1_RCT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.120.1480 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
B | 1.10.10.2170 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) | |
A | 1.20.120.1480 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
A | 1.10.10.2170 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11626 | TRF2-interacting telomeric protein/Rap1 - C terminal domain (Rap1_C) | TRF2-interacting telomeric protein/Rap1 - C terminal domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038104 | TRF2-interacting telomeric protein/Rap1, C-terminal domain superfamily | Homologous Superfamily | |
IPR017930 | Myb domain | Domain | |
IPR001357 | BRCT domain | Domain | |
IPR015280 | Rap1, DNA-binding domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR039595 | TE2IP/Rap1 | Family | |
IPR021661 | TRF2-interacting telomeric protein/Rap1, C-terminal | Domain | |
IPR001005 | SANT/Myb domain | Domain | |
IPR041083 | AAA lid domain | Domain | |
IPR001025 | Bromo adjacent homology (BAH) domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily | |
IPR050311 | Origin Recognition Complex 1/Cell Division Control Protein 6 | Family |