3OHN

Crystal structure of the FimD translocation domain

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUsher_1ste3ohnA1 A: beta barrelsX: Outer membrane meander beta-barrelsH: Usher PapC translocation pore (From Topology)T: Usher PapC translocation poreF: Usher_1stECOD (1.6)
AUsher_2nde3ohnA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Usher_2ndECOD (1.6)
BUsher_1ste3ohnB1 A: beta barrelsX: Outer membrane meander beta-barrelsH: Usher PapC translocation pore (From Topology)T: Usher PapC translocation poreF: Usher_1stECOD (1.6)
BUsher_2nde3ohnB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Usher_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00577Outer membrane usher protein (Usher)Outer membrane usher protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Outer membrane usher protein FimD

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR042186Outer membrane usher protein FimD, plug domainHomologous Superfamily
A, B
IPR037224PapC, N-terminal domain superfamilyHomologous Superfamily
A, B
IPR018030Fimbrial membrane usher, conserved siteConserved Site
A, B
IPR025885PapC, N-terminal domainDomain
A, B
IPR043142PapC-like, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR025949PapC-like, C-terminal domainDomain
A, B
IPR000015Outer membrane usher proteinFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B
OPMTransmembraneBeta-barrel transmembraneFimbrial usher porin (n=24,S=26)Fimbrial usher porin

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELBeta-Barrel Membrane Proteins: Monomeric/DimericP pilus FimD usher bound to FimC:FimH substrate