3NXZ
Crystal Structure of UreE from Helicobacter pylori (Cu2+ bound form)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UreE_N | e3nxzA1 | A: beta barrels | X: Urease metallochperone UreE-N (From Topology) | H: Urease metallochperone UreE-N (From Topology) | T: Urease metallochperone UreE-N | F: UreE_N | ECOD (1.6) |
A | UreE_C | e3nxzA2 | A: a+b two layers | X: Alpha-beta plaits | H: Urease metallochaperone UreE, C-terminal domain (From Topology) | T: Urease metallochaperone UreE, C-terminal domain | F: UreE_C | ECOD (1.6) |
C | UreE_N | e3nxzC1 | A: beta barrels | X: Urease metallochperone UreE-N (From Topology) | H: Urease metallochperone UreE-N (From Topology) | T: Urease metallochperone UreE-N | F: UreE_N | ECOD (1.6) |
C | UreE_C | e3nxzC2 | A: a+b two layers | X: Alpha-beta plaits | H: Urease metallochaperone UreE, C-terminal domain (From Topology) | T: Urease metallochaperone UreE, C-terminal domain | F: UreE_C | ECOD (1.6) |
D | UreE_N | e3nxzD1 | A: beta barrels | X: Urease metallochperone UreE-N (From Topology) | H: Urease metallochperone UreE-N (From Topology) | T: Urease metallochperone UreE-N | F: UreE_N | ECOD (1.6) |
D | UreE_C | e3nxzD2 | A: a+b two layers | X: Alpha-beta plaits | H: Urease metallochaperone UreE, C-terminal domain (From Topology) | T: Urease metallochaperone UreE, C-terminal domain | F: UreE_C | ECOD (1.6) |
B | UreE_N | e3nxzB1 | A: beta barrels | X: Urease metallochperone UreE-N (From Topology) | H: Urease metallochperone UreE-N (From Topology) | T: Urease metallochperone UreE-N | F: UreE_N | ECOD (1.6) |
B | UreE_C | e3nxzB2 | A: a+b two layers | X: Alpha-beta plaits | H: Urease metallochaperone UreE, C-terminal domain (From Topology) | T: Urease metallochaperone UreE, C-terminal domain | F: UreE_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.260.20 | Mainly Beta | Sandwich | HSP40/DNAj peptide-binding domain | Urease metallochaperone UreE, N-terminal domain | CATH (4.3.0) |
A | 3.30.70.790 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | UreE, C-terminal domain | CATH (4.3.0) |
C | 2.60.260.20 | Mainly Beta | Sandwich | HSP40/DNAj peptide-binding domain | Urease metallochaperone UreE, N-terminal domain | CATH (4.3.0) |
C | 3.30.70.790 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | UreE, C-terminal domain | CATH (4.3.0) |
D | 2.60.260.20 | Mainly Beta | Sandwich | HSP40/DNAj peptide-binding domain | Urease metallochaperone UreE, N-terminal domain | CATH (4.3.0) |
D | 3.30.70.790 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | UreE, C-terminal domain | CATH (4.3.0) |
B | 2.60.260.20 | Mainly Beta | Sandwich | HSP40/DNAj peptide-binding domain | Urease metallochaperone UreE, N-terminal domain | CATH (4.3.0) |
B | 3.30.70.790 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | UreE, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02814 | UreE urease accessory protein, N-terminal domain (UreE_N) | UreE urease accessory protein, N-terminal domain | UreE is a urease accessory protein. Urease Pfam:PF00449 hydrolyses urea into ammonia and carbamic acid. | Domain | |
PF05194 | UreE urease accessory protein, C-terminal domain (UreE_C) | UreE urease accessory protein, C-terminal domain | UreE is a urease accessory protein. Urease Pfam:PF00449 hydrolyses urea into ammonia and carbamic acid. The C-terminal region of members of this family contains a His rich Nickel binding site. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036118 | UreE urease accessory, N-terminal domain superfamily | Homologous Superfamily | |
IPR007864 | Urease accessory protein UreE, C-terminal domain | Domain | |
IPR012406 | Urease accessory protein UreE | Family | |
IPR004029 | UreE urease accessory, N-terminal | Domain |