3MAJ
Crystal structure of putative DNA processing protein DprA from Rhodopseudomonas palustris CGA009
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF17782 | e3majA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF17782 | ECOD (1.6) |
A | PF21102 | e3majA3 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF21102 | ECOD (1.6) |
A | PF02481 | e3majA4 | A: a/b three-layered sandwiches | X: MCP/YpsA-related (From Topology) | H: MCP/YpsA-related (From Topology) | T: MCP/YpsA-related | F: PF02481 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21102 | DprA-like N-terminal HHH domain (DprA_N) | DprA-like N-terminal HHH domain | This Helix-hairpin-helix domain is found at the N-terminus of predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake. | Domain | |
PF02481 | DNA recombination-mediator protein A (DNA_processg_A) | DNA recombination-mediator protein A | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DNA processing chain A | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041614 | DprA, winged helix domain | Domain | |
IPR003488 | DNA recombination-mediator protein A | Family | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |