3LTI
Crystal structure of the Escherichia coli RNA polymerase beta subunit beta2-betai4 domains
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e3ltiA3 | A: a+b two layers | X: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase (From Topology) | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase (From Topology) | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF04561 | e3ltiA1 | A: a+b complex topology | X: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology) | H: insertion domain in beta subunit of DNA dependent RNA-polymerase (From Topology) | T: insertion domain in beta subunit of DNA dependent RNA-polymerase | F: PF04561 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1110.10 | Alpha Beta | Alpha-Beta Complex | Dna-directed Rna Polymerase Ii 140kd Polypeptide | Chain: B | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04561 | RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) | RNA polymerase Rpb2, domain 2 | RNA polymerases catalyse the DNA dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Rpb2 is the second largest subunit of the RNA po ... | Domain | |
PF04563 | RNA polymerase beta subunit (RNA_pol_Rpb2_1) | RNA polymerase beta subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain | Domain | |
IPR007121 | RNA polymerase, beta subunit, conserved site | Conserved Site | |
IPR014724 | RNA polymerase Rpb2, OB-fold | Homologous Superfamily | |
IPR007642 | RNA polymerase Rpb2, domain 2 | Domain | |
IPR015712 | DNA-directed RNA polymerase, subunit 2 | Family | |
IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily | Homologous Superfamily | |
IPR042107 | DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily | Homologous Superfamily | |
IPR037034 | RNA polymerase Rpb2, domain 2 superfamily | Homologous Superfamily | |
IPR007645 | RNA polymerase Rpb2, domain 3 | Domain | |
IPR019462 | DNA-directed RNA polymerase, beta subunit, external 1 domain | Domain | |
IPR010243 | DNA-directed RNA polymerase beta subunit, bacterial-type | Family | |
IPR007644 | RNA polymerase, beta subunit, protrusion | Domain | |
IPR007641 | RNA polymerase Rpb2, domain 7 | Domain |