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 3LR5 | pdb_00003lr5

Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at neutral pH

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilySensory domain-like 8053916 3001802 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySensory domain-like 8053916 3001802 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BCytochrome_CBB3e3lr5B1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: Cytochrome_CBB3ECOD (v295.2)
AAAR2e3lr5A1 A: alpha arraysX: Repetitive alpha hairpinsH: ARM repeatT: ARM repeatF: AAR2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.450.300 Alpha Beta 2-Layer Sandwich Beta-Lactamase Sensor histidine kinase RisS, periplasmic domainCATH (4.3.0)
A3.30.450.300 Alpha Beta 2-Layer Sandwich Beta-Lactamase Sensor histidine kinase RisS, periplasmic domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16524Periplasmic domain of Sensor histidine kinase RisS (RisS_PPD)Periplasmic domain of Sensor histidine kinase RisSRisS_PPD is the periplasmic domain of the sensor histidine kinase RisS. It is purported to be the region of the kinase that senses the pH of the environs. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Sensor protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR038421Sensor histidine kinase RisS, periplasmic domain superfamilyHomologous Superfamily
A, B
IPR003594Histidine kinase/HSP90-like ATPase domainDomain
A, B
IPR005467Histidine kinase domainDomain
A, B
IPR004358Signal transduction histidine kinase-related protein, C-terminalDomain
A, B
IPR032408Sensor histidine kinase RisS, periplasmic domainDomain
A, B
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyHomologous Superfamily
A, B
IPR003660HAMP domainDomain
A, B
IPR050980Two-component sensor histidine kinaseFamily
A, B
IPR036890Histidine kinase/HSP90-like ATPase superfamilyHomologous Superfamily
A, B
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainDomain