3LL7

Crystal structure of putative methyltransferase PG_1098 from Porphyromonas gingivalis W83

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF07970	e3ll7A1	A: alpha arrays	X: N-terminal domain in putative methyltransferase PG_1098 (From Topology)	H: N-terminal domain in putative methyltransferase PG_1098 (From Topology)	T: N-terminal domain in putative methyltransferase PG_1098	F: EUF07970	ECOD (1.6)
A	PG_1098_Fer	e3ll7A3	A: a+b two layers	X: Alpha-beta plaits	H: Ferredoxin-like domain in ThiI (From Topology)	T: Ferredoxin-like domain in ThiI	F: PG_1098_Fer	ECOD (1.6)
A	EUF08437	e3ll7A4	A: a+b two layers	X: THUMP domain-like (From Topology)	H: THUMP domain-like (From Topology)	T: THUMP domain-like	F: EUF08437	ECOD (1.6)
A	Methyltransf_15	e3ll7A2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Methyltransf_15	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.1110	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Methyltransferase PG1098, N-terminal domain	CATH (4.3.0)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF22013	PG_1098 ferredoxin-like domain (PG_1098_Fer)	PG_1098 ferredoxin-like domain	This entry represents a ferredoxin-like domain found in a group of poorly characterised sequences, including the putative methyltransferase PG_1098 from Porphyromonas gingivalis (Swiss:Q7MVG6, PDB:3ll7). Members of this entry contain a THUMP-like dom ...	This entry represents a ferredoxin-like domain found in a group of poorly characterised sequences, including the putative methyltransferase PG_1098 from Porphyromonas gingivalis (Swiss:Q7MVG6, PDB:3ll7). Members of this entry contain a THUMP-like domain at the C-terminal (Pfam:PF18096), following this domain.	Domain
A	PF18096	THUMP domain-like (Thump_like)	THUMP domain-like	This is a domain of unknown function found in bacteria.	Domain
A	PF21911	N-terminal domain in putative methyltransferase PG_1098 (PG_1098_N)	N-terminal domain in putative methyltransferase PG_1098	This small alpha-helical domain is found at the N-terminus of putative methyltransferase proteins.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR054168	PG_1098 ferredoxin-like domain	Domain
A	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A	IPR041497	THUMP-like domain	Domain
A	IPR054111	PG_1098, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.