3KYC
Human SUMO E1 complex with a SUMO1-AMP mimic
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | d3kycd_ | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Ubiquitin-like | Ubiquitin-related | SUMO-1 (smt3 homologue) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CC (catalytic cysteine) domain-like | 8003545 | 3000140 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Activating enzymes of the ubiquitin-like proteins | 8003535 | 3000112 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Activating enzymes of the ubiquitin-like proteins | 8003535 | 3000112 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Activating enzymes of the ubiquitin-like proteins | 8003541 | 3000112 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SCCH domain-like | 8003544 | 3000139 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Activating enzymes of the ubiquitin-like proteins | 8003541 | 3000112 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | E2 binding domain-like | 8003943 | 3000147 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Ubiquitin-like | 8043414 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ThiF_3 | e3kycA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Activating enzymes of the ubiquitin-like proteins | F: ThiF_3 | ECOD (1.6) |
B | UBA_e1_thiolCys | e3kycB1 | A: alpha arrays | X: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology) | H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology) | T: Catalytic cysteine domain in ubiquitin-activating enzyme | F: UBA_e1_thiolCys | ECOD (1.6) |
B | UAE_UbL | e3kycB3 | A: a+b two layers | X: beta-Grasp | H: E2-binding domain of E1 (From Topology) | T: E2-binding domain of E1 | F: UAE_UbL | ECOD (1.6) |
B | ThiF_1 | e3kycB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Activating enzymes of the ubiquitin-like proteins | F: ThiF_1 | ECOD (1.6) |
C [auth D] | Rad60-SLD | e3kycD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Rad60-SLD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 1.10.10.520 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | CATH (4.3.0) |
B | 3.10.290.20 | Alpha Beta | Roll | Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region | Chain A | CATH (4.3.0) |
C [auth D] | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00899 | ThiF family (ThiF) | ThiF family | This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1 [1-3]. | Domain | |
PF14732 | Ubiquitin/SUMO-activating enzyme ubiquitin-like domain (UAE_UbL) | Ubiquitin/SUMO-activating enzyme ubiquitin-like domain | This is the C-terminal domain of ubiquitin-activating enzyme and SUMO-activating enzyme 2. It is structurally similar to ubiquitin. This domain is involved in E1-SUMO-thioester transfer to the SUMO E2 conjugating protein [1]. | Domain | |
C [auth D] | PF11976 | Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) | Ubiquitin-2 like Rad60 SUMO-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q9UBE0 | : ||
Q9UBT2 | : ||
C [auth D] | P63165 | :