Crystal structure of Putative Peptide:N-glycosidase F (PNGase F) (YP_210507.1) from Bacteroides fragilis NCTC 9343 at 2.30 A resolution


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DNuc_deoxyrib_tre3ks7D1 A: alpha arraysX: jelly-rollH: Galactose-binding domain-likeT: Galactose-binding domain-likeF: Nuc_deoxyrib_trECOD (v295)
CNuc_deoxyrib_tre3ks7C1 A: alpha arraysX: jelly-rollH: Galactose-binding domain-likeT: Galactose-binding domain-likeF: Nuc_deoxyrib_trECOD (v295)
BNuc_deoxyrib_tre3ks7B1 A: alpha arraysX: jelly-rollH: Galactose-binding domain-likeT: Galactose-binding domain-likeF: Nuc_deoxyrib_trECOD (v295)
AN-glycanase_Ce3ks7A2 A: alpha arraysX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: N-glycanase_CECOD (v295)
ABSH_RNDe3ks7A3 A: alpha arraysX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: BSH_RNDECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
D2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
C2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
B2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
A2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
A2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)