3KQU
Three Conformational Snapshots of the Hepatitis C Virus NS3 Helicase Reveal a Ratchet Translocation Mechanism
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | EUF07999 | e3kquD5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
D | Helicase_C_7 | e3kquD4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
D | DEAD_3 | e3kquD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
F | EUF07999 | e3kquF5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
F | Helicase_C_7 | e3kquF4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
F | DEAD_3 | e3kquF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
A | EUF07999 | e3kquA5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
A | Helicase_C_7 | e3kquA4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
A | DEAD_3 | e3kquA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
B | EUF07999 | e3kquB5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
B | Helicase_C_7 | e3kquB4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
B | DEAD_3 | e3kquB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
C | EUF07999 | e3kquC5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
C | Helicase_C_7 | e3kquC4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
C | DEAD_3 | e3kquC2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
E | EUF07999 | e3kquE5 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: EUF07999 | ECOD (1.6) |
E | Helicase_C_7 | e3kquE4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_7 | ECOD (1.6) |
E | DEAD_3 | e3kquE2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22027 | NS3 RNA helicase, C-terminal helical domain (NS3_helicase_C) | NS3 RNA helicase, C-terminal helical domain | This entry represents the C-terminal all-alpha helical domain (referred to as domain 3) of hepatitis C virus RNA helicase (NS3) [1-5]. NS3 helicase consists of three domains, separated by a series of clefts. Bound ssDNA lies in a channel that separat ... | Domain | |
PF07652 | Flavivirus DEAD domain (Flavi_DEAD) | Flavivirus DEAD domain | - | Domain | |