3KJJ
Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis (hexagonal crystal form)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
A | SCOP2 Family | YjgF/L-PSP | 8059850 | 4001510 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | YjgF-like | 8059851 | 3001733 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
J | Ribonuc_L-PSP | e3kjjJ1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
L | Ribonuc_L-PSP | e3kjjL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
A | Ribonuc_L-PSP | e3kjjA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
B | Ribonuc_L-PSP | e3kjjB1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
C | Ribonuc_L-PSP | e3kjjC1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
D | Ribonuc_L-PSP | e3kjjD1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
E | Ribonuc_L-PSP | e3kjjE1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
F | Ribonuc_L-PSP | e3kjjF1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
G | Ribonuc_L-PSP | e3kjjG1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
H | Ribonuc_L-PSP | e3kjjH1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
I | Ribonuc_L-PSP | e3kjjI1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
K | Ribonuc_L-PSP | e3kjjK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: YjgF-like (From Topology) | T: YjgF-like | F: Ribonuc_L-PSP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01042 | Endoribonuclease L-PSP (Ribonuc_L-PSP) | Endoribonuclease L-PSP | Endoribonuclease active on single-stranded mRNA. Inhibits protein synthesis by cleavage of mRNA [1]. Previously thought to inhibit protein synthesis initiation [2]. This protein may also be involved in the regulation of purine biosynthesis [3]. Yjg ... | Domain |