3KIO
mouse RNase H2 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Rap30/74 heterodimerisation domain-like | 8053792 | 3000142 | SCOP2B (2022-06-29) |
C | SCOP2 Family | RNase H2 C subunit-like | 8051036 | 4007170 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Rap30/74 heterodimerisation domain-like | 8091473 | 3000142 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Ribonuclease H-like | 8063999 | 4000541 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribonuclease H-like | 8064000 | 3000143 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | RNase_H2-Ydr279_1st | e3kioB1 | A: beta complex topology | X: triple barrel (From Homology) | H: triple barrel | T: RNase H2 subunits B and C | F: RNase_H2-Ydr279_1st | ECOD (1.6) |
B | RNase_H2-Ydr279_2nd | e3kioB2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: RNase_H2-Ydr279_2nd | ECOD (1.6) |
C | RNase_H2-Ydr279_1st | e3kioC1 | A: beta complex topology | X: triple barrel (From Homology) | H: triple barrel | T: RNase H2 subunits B and C | F: RNase_H2-Ydr279_1st | ECOD (1.6) |
A | RNase_HII | e3kioA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: RNase_HII | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 2.40.128.680 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
A | 3.30.420.10 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
A | 1.10.10.460 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Ribonuclease hii. Domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09468 | Ydr279p protein family (RNase H2 complex component) wHTH domain (RNase_H2-Ydr279) | Ydr279p protein family (RNase H2 complex component) wHTH domain | RNases H are enzymes that specifically hydrolyse RNA when annealed to a complementary DNA and are present in all living organisms. In yeast RNase H2 is composed of a complex of three proteins (Rnh2Ap, Ydr279p and Ylr154p), this family represents the ... | Domain | |
PF17745 | Ydr279p protein triple barrel domain (Ydr279_N) | Ydr279p protein triple barrel domain | RNases H are enzymes that specifically hydrolyse RNA when annealed to a complementary DNA and are present in all living organisms. In yeast RNase H2 is composed of a complex of three proteins (Rnh2Ap, Ydr279p and Ylr154p), this family represents the ... | Domain | |
PF08615 | Ribonuclease H2 non-catalytic subunit (Ylr154p-like) (RNase_H2_suC) | Ribonuclease H2 non-catalytic subunit (Ylr154p-like) | - | Family | |
PF01351 | Ribonuclease HII (RNase_HII) | Ribonuclease HII | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR040456 | Ribonuclease H2 subunit B | Family | |
IPR041195 | Rnh202, triple barrel domain | Domain | |
IPR019024 | Ribonuclease H2 subunit B, wHTH domain | Domain | |
IPR052863 | Ribonuclease H2 subunit C | Family | |
IPR013924 | Ribonuclease H2, subunit C | Family | |
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR004649 | Ribonuclease H2, subunit A | Family | |
IPR024567 | Ribonuclease HII/HIII domain | Domain | |
IPR001352 | Ribonuclease HII/HIII | Family | |
IPR023160 | Ribonuclease HII, helix-loop-helix cap domain superfamily | Homologous Superfamily | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |