3K6G
Crystal structure of Rap1 and TRF2 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | UBA-like | 8054005 | 3001235 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Rap1 C-terminal domain | 8046769 | 4005289 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | UBA-like | 8054005 | 3001235 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | UBA-like | 8054005 | 3001235 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Rap1-binding motif-like | 8092934 | 3002646 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Rap1-binding motif-like | 8092934 | 3002646 | SCOP2B (2022-06-29) |
F | SCOP2 Family | Rap1-binding motif-like | 8046135 | 4004895 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Rap1-binding motif-like | 8092934 | 3002646 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rap1_C | e3k6gA2 | A: alpha arrays | X: Rap1 C-terminal domain (From Topology) | H: Rap1 C-terminal domain (From Topology) | T: Rap1 C-terminal domain | F: Rap1_C | ECOD (1.6) |
A | rap1_RCT_1 | e3k6gA1 | A: alpha arrays | X: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | H: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | T: Repressor activator protein 1 (RAP1) helical bundle domain | F: rap1_RCT_1 | ECOD (1.6) |
B | Rap1_C | e3k6gB2 | A: alpha arrays | X: Rap1 C-terminal domain (From Topology) | H: Rap1 C-terminal domain (From Topology) | T: Rap1 C-terminal domain | F: Rap1_C | ECOD (1.6) |
B | rap1_RCT_1 | e3k6gB1 | A: alpha arrays | X: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | H: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | T: Repressor activator protein 1 (RAP1) helical bundle domain | F: rap1_RCT_1 | ECOD (1.6) |
C | Rap1_C | e3k6gC2 | A: alpha arrays | X: Rap1 C-terminal domain (From Topology) | H: Rap1 C-terminal domain (From Topology) | T: Rap1 C-terminal domain | F: Rap1_C | ECOD (1.6) |
C | rap1_RCT_1 | e3k6gC1 | A: alpha arrays | X: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | H: Repressor activator protein 1 (RAP1) helical bundle domain (From Topology) | T: Repressor activator protein 1 (RAP1) helical bundle domain | F: rap1_RCT_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11626 | TRF2-interacting telomeric protein/Rap1 - C terminal domain (Rap1_C) | TRF2-interacting telomeric protein/Rap1 - C terminal domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038104 | TRF2-interacting telomeric protein/Rap1, C-terminal domain superfamily | Homologous Superfamily | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR039595 | TE2IP/Rap1 | Family | |
IPR021661 | TRF2-interacting telomeric protein/Rap1, C-terminal | Domain | |
IPR015010 | TERF2-interacting telomeric protein 1, Myb domain | Domain | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR017357 | Telomeric repeat-binding factor 1/2 | Family | |
IPR031902 | Telomeric repeat-binding factor 2, Rap1-binding domain | Domain | |
IPR030657 | Telomeric repeat-binding factor 2 | Family | |
IPR017930 | Myb domain | Domain | |
IPR013867 | Telomere repeat-binding factor, dimerisation domain | Domain | |
IPR036507 | Telomere repeat-binding factor, dimerisation domain superfamily | Homologous Superfamily | |
IPR001005 | SANT/Myb domain | Domain |