3J9M

Structure of the human mitochondrial ribosome (class 1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
Z [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
CA [auth 4]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
HA [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
DB [auth AB]SCOP2 FamilyRibosomal protein S2-like 8063849 4003744 SCOP2 (2022-06-29)
DB [auth AB]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8063850 3001397 SCOP2 (2022-06-29)
KB [auth AI]SCOP2B SuperfamilyTranslational machinery components 8098948 3000571 SCOP2B (2022-06-29)
LB [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins 8095431 3000135 SCOP2B (2022-06-29)
MB [auth AK]SCOP2 FamilyRibosomal protein S14p/S29e 8047593 4003647 SCOP2 (2022-06-29)
MB [auth AK]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052599 3000068 SCOP2 (2022-06-29)
SB [auth AQ]SCOP2 FamilyRibosomal protein S21 8048659 4006173 SCOP2 (2022-06-29)
SB [auth AQ]SCOP2 SuperfamilyRibosomal protein S21 8053089 3002159 SCOP2 (2022-06-29)
TB [auth AR]SCOP2 FamilyMRP-S22-like 8051735 4007491 SCOP2 (2022-06-29)
TB [auth AR]SCOP2 SuperfamilyMitochondrial 28S ribosomal protein S22-like 8051932 3002074 SCOP2 (2022-06-29)
AC [auth AY]SCOP2 FamilyMitochondrial 28S ribosomal protein S31-like 8051225 4007256 SCOP2 (2022-06-29)
AC [auth AY]SCOP2 SuperfamilyMitochondrial 28S ribosomal protein S31-like 8090914 3002471 SCOP2 (2022-06-29)
CC [auth A0]SCOP2 FamilyMitochondrial 28S ribosomal protein S34-like 8044792 4004136 SCOP2 (2022-06-29)
CC [auth A0]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8091481 3000334 SCOP2 (2022-06-29)
I [auth K]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L]Ribosomal_L14e3j9mL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
K [auth M]Ribosomal_L27Ae3j9mM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
L [auth N]Ribosomal_L16e3j9mN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth O]Ribosomal_L17e3j9mO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
N [auth P]Ribosomal_L18pe3j9mP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
O [auth Q]Ribosomal_L19e3j9mQ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
P [auth R]Ribosomal_L20e3j9mR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
Q [auth S]Ribosomal_L21pe3j9mS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
R [auth T]Ribosomal_L22e3j9mT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth U]Ribosomal_L23_2e3j9mU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
T [auth V]ribosomal_L24_1e3j9mV1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
U [auth W]Ribosomal_L27e3j9mW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
V [auth X]Ribosomal_L28_1e3j9mX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
W [auth Y]MRP-L47e3j9mY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
X [auth Z]Ribosomal_L30e3j9mZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Y [auth 0]KOG4080e3j9m01 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
Z [auth 1]Ribosomal_L33e3j9m11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AA [auth 2]Ribosomal_L34e3j9m21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
BA [auth 3]Ribosomal_L35pe3j9m31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
CA [auth 4]Ribosomal_L36e3j9m41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
C [auth D]Ribosomal_L2e3j9mD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
C [auth D]Ribosomal_L2_Ce3j9mD2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
DA [auth 5]PDCD9e3j9m51 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
EA [auth 6]PBPe3j9m61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
FA [auth 7]TGSe3j9m71 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
FA [auth 7]tRNA_SADe3j9m72 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
GA [auth 8]MRP-L28e3j9m81 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)
HA [auth 9]MRP-L27e3j9m91 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
IA [auth a]MRP-S32e3j9ma1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
JA [auth b]L51_S25_CI-B8e3j9mb1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
KA [auth c]Ribonucleas_3_3e3j9mc1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
KA [auth c]dsrme3j9mc2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
LA [auth d]Tim44e3j9md1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
MA [auth e]MRP-L46e3j9me1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
D [auth E]Ribosomal_L3e3j9mE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
NA [auth f]Ribosomal_S10_2e3j9mf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
OA [auth g]Img2e3j9mg1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
PA [auth h]Ribosomal_L50e3j9mh1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
QA [auth i]MRP-L51e3j9mi1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
RA [auth j]EUF08791e3j9mj1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
SA [auth k]MRP_L53e3j9mk1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
UA [auth m]Mitoc_L55e3j9mm1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
VA [auth o]MRP-63e3j9mo1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
WA [auth p]RF-1_Ne3j9mp1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
E [auth F]Ribosomal_L4e3j9mF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
XA [auth q]CR6_interacte3j9mq1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
YA [auth r]Ribosomal_S18e3j9mr1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
ZA [auth s]PDCD9e3j9ms1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
DB [auth AB]Ribosomal_S2_1e3j9mAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_1ECOD (1.6)
EB [auth AC]MRP-S24e3j9mAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: MRP-S24ECOD (1.6)
FB [auth AD]Ribosomal_S5_Ce3j9mAD3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
FB [auth AD]Ribosomal_S5_1e3j9mAD2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_1ECOD (1.6)
FB [auth AD]KOG2646e3j9mAD1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: KOG2646ECOD (1.6)
GB [auth AE]Ribosomal_S6_1e3j9mAE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6_1ECOD (1.6)
F [auth H]Ribosomal_L9_N_1e3j9mH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
HB [auth AF]Ribosomal_S7e3j9mAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
IB [auth AG]Ribosomal_S9e3j9mAG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
JB [auth AH]Ribosomal_S10_2e3j9mAH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
KB [auth AI]Ribosomal_S11e3j9mAI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
LB [auth AJ]Ribosom_S12_S23e3j9mAJ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MB [auth AK]Ribosomal_S14_1e3j9mAK1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
NB [auth AL]Ribosomal_S15_1e3j9mAL1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
OB [auth AM]Ribosomal_S16e3j9mAM1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
PB [auth AN]Ribosomal_S17_1e3j9mAN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
QB [auth AO]Ribosomal_S18e3j9mAO1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
G [auth I]Ribosomal_L10e3j9mI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
RB [auth AP]Ribosomal_S18e3j9mAP1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SB [auth AQ]Ribosomal_S21_2e3j9mAQ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21_2ECOD (1.6)
TB [auth AR]MRP-S22e3j9mAR1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: MRP-S22ECOD (1.6)
UB [auth AS]MRP-S23e3j9mAS1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: MRP-S23ECOD (1.6)
VB [auth AT]L51_S25_CI-B8e3j9mAT1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
WB [auth AU]MRP-S26e3j9mAU1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: MRP-S26ECOD (1.6)
XB [auth AV]MRP-S27e3j9mAV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: MRP-S27ECOD (1.6)
YB [auth AW]MRP-S35e3j9mAW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: MRP-S35ECOD (1.6)
ZB [auth AX]DAP3_C,DAP3_Ne3j9mAX1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DAP3_C,DAP3_NECOD (1.6)
AC [auth AY]MRP-S31e3j9mAY1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: MRP-S31ECOD (1.6)
H [auth J]Ribosomal_L11e3j9mJ1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
H [auth J]Ribosomal_L11_Ne3j9mJ2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
BC [auth AZ]MRP-S33e3j9mAZ1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: MRP-S33ECOD (1.6)
CC [auth A0]MRP-S34e3j9mA01 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: MRP-S34ECOD (1.6)
DC [auth A1]UNK_F_TYPEe3j9mA11 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: UNK_F_TYPEECOD (1.6)
EC [auth A2]KOG4695e3j9mA21 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: KOG4695ECOD (1.6)
FC [auth A3]DUF1713e3j9mA31 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: DUF1713ECOD (1.6)
GC [auth A4]KOG4422e3j9mA41 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: KOG4422ECOD (1.6)
I [auth K]Ribosomal_L13e3j9mK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
K [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
L [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth O]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
M [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
N [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
P [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
Q [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
R [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth V]PF00467KOW motif (KOW)KOW motif- Family
W [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
X [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Y [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
AA [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
BA [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
C [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth D]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
C [auth D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
EA [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
D [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
D [auth E]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
E [auth F]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
E [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
DB [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EB [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
FB [auth AD]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
FB [auth AD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
FB [auth AD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
GB [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
F [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
F [auth H]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
HB [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
IB [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JB [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KB [auth AI]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
LB [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
MB [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
NB [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
OB [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PB [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
QB [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
G [auth I]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
G [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
RB [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SB [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
TB [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
UB [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
VB [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
WB [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
ZB [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
H [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
H [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
H [auth J]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
BC [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
CC [auth A0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
DC [auth A1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
EC [auth A2]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
GC [auth A4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
GC [auth A4]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
I [auth K]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
I [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
16S rRNA---
J [auth L]uL14m
K [auth M]uL15m
L [auth N]uL16m
M [auth O]bL17m
N [auth P]uL18m
O [auth Q]bL19m
P [auth R]bL20m
Q [auth S]bL21m
R [auth T]uL22m
S [auth U]uL23m
mt-tRNAVal---
T [auth V]uL24m
U [auth W]bL27m
V [auth X]bL28m---
W [auth Y]uL29m
X [auth Z]uL30m
Y [auth 0]bL32m
Z [auth 1]bL33m
AA [auth 2]bL34m
BA [auth 3]bL35m
CA [auth 4]bL36m
C [auth D]uL2m
DA [auth 5]mL37
EA [auth 6]mL38-
FA [auth 7]mL39
GA [auth 8]mL40
HA [auth 9]mL41
IA [auth a]mL42
JA [auth b]mL43
KA [auth c]mL44
LA [auth d]mL45
MA [auth e]mL46
D [auth E]uL3m
NA [auth f]mL48-
OA [auth g]mL49
PA [auth h]mL50-
QA [auth i]mL51
RA [auth j]mL52
SA [auth k]mL53-
TA [auth l]mL54
UA [auth m]bL31m
VA [auth o]mL63
WA [auth p]mL62 (ICT1)
E [auth F]uL4m
XA [auth q]mL64 (CRIF1)-
YA [auth r]mL66 (bS18a)
ZA [auth s]mL65 (mS30)
AB [auth t]Unknown protein/protein extension---
BB [auth u]E-site tRNA---
CB [auth AA]12S rRNA---
DB [auth AB]uS2m
EB [auth AC]uS3m
FB [auth AD]uS5m
GB [auth AE]bS6m
F [auth H]bL9m
HB [auth AF]uS7m
IB [auth AG]uS9m
JB [auth AH]uS10m-
KB [auth AI]uS11m
LB [auth AJ]uS12m
MB [auth AK]uS14m
NB [auth AL]uS15m
OB [auth AM]bS16m
PB [auth AN]uS17m
QB [auth AO]mS40 (bS18b)
G [auth I]uL10m
RB [auth AP]bS18m (bS18c)
SB [auth AQ]bS21m
TB [auth AR]mS22
UB [auth AS]mS23
VB [auth AT]mS25
WB [auth AU]mS26
XB [auth AV]mS27
YB [auth AW]bS1m
ZB [auth AX]mS29
AC [auth AY]mS31
H [auth J]uL11m
BC [auth AZ]mS33
CC [auth A0]mS34
DC [auth A1]mS35
EC [auth A2]mS37
FC [auth A3]mS38-
GC [auth A4]mS39
I [auth K]uL13m

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth L]IPR000218Large ribosomal subunit protein uL14Family
K [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth M]IPR030878Large ribosomal subunit protein uL15Family
K [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth N]IPR047873Large ribosomal subunit protein uL16Family
M [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth O]IPR000456Large ribosomal subunit protein bL17Family
N [auth P]IPR005484Large ribosomal subunit protein uL18Family
N [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth Q]IPR001857Large ribosomal subunit protein bL19Family
O [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth R]IPR005813Large ribosomal subunit protein bL20Family
Q [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth S]IPR001787Large ribosomal subunit protein bL21Family
Q [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth T]IPR001063Large ribosomal subunit protein uL22Family
S [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth V]IPR003256Large ribosomal subunit protein uL24Family
T [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth V]IPR005824KOWDomain
T [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth W]IPR001684Large ribosomal subunit protein bL27Family
W [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
W [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
X [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Y [auth 0]IPR002677Large ribosomal subunit protein bL32Family
Y [auth 0]IPR051991Mitochondrial ribosomal protein bL32Family
Y [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 1]IPR052008Mitochondrial ribosomal protein bL33Family
Z [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth 1]IPR001705Large ribosomal subunit protein bL33Family
AA [auth 2]IPR000271Large ribosomal subunit protein bL34Family
BA [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
BA [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth 4]IPR000473Large ribosomal subunit protein bL36Family
CA [auth 4]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
CA [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
C [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth D]IPR002171Large ribosomal subunit protein uL2Family
DA [auth 5]IPR052482Mitochondrial large ribosomal subunit mL37Family
DA [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
EA [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
EA [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
EA [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
FA [auth 7]IPR012676TGS-likeHomologous Superfamily
FA [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
FA [auth 7]IPR050062Proline-tRNA synthetaseFamily
FA [auth 7]IPR004095TGSDomain
FA [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
GA [auth 8]IPR019192Large ribosomal subunit protein mL40Family
GA [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
HA [auth 9]IPR019189Large ribosomal subunit protein mL41Family
IA [auth a]IPR019346Large ribosomal subunit protein mL42Family
JA [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth b]IPR039927Large ribosomal subunit protein mL43Family
KA [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
KA [auth c]IPR014720Double-stranded RNA-binding domainDomain
LA [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
LA [auth d]IPR007379Tim44-like domainDomain
LA [auth d]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
MA [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
MA [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
MA [auth e]IPR040008Large ribosomal subunit protein mL46Family
MA [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
D [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth E]IPR000597Large ribosomal subunit protein uL3Family
NA [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth f]IPR027487Large ribosomal subunit protein mL48Family
NA [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth g]IPR007740Large ribosomal subunit protein mL49Family
PA [auth h]IPR018305Large ribosomal subunit protein mL50Family
QA [auth i]IPR019373Large ribosomal subunit protein mL51Family
RA [auth j]IPR034596Large ribosomal subunit protein mL52Family
SA [auth k]IPR019716Large ribosomal subunit protein mL53Family
SA [auth k]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
TA [auth l]IPR013870Large ribosomal subunit protein mL54Family
UA [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UA [auth m]IPR018615Large ribosomal subunit protein mL55Family
VA [auth o]IPR016576Large ribosomal subunit protein mL63Family
WA [auth p]IPR052104Mitochondrial Release Factor mL62Family
WA [auth p]IPR000352Peptide chain release factor class IDomain
E [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth F]IPR002136Large ribosomal subunit protein uL4Family
E [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
XA [auth q]IPR018472Large ribosomal subunit protein mL64Family
XA [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
YA [auth r]IPR001648Small ribosomal subunit protein bS18Family
YA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
ZA [auth s]IPR039982Large ribosomal subunit protein mL65Family
ZA [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
DB [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
DB [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
DB [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
DB [auth AB]IPR001865Small ribosomal subunit protein uS2Family
EB [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
FB [auth AD]IPR000851Small ribosomal subunit protein uS5Family
FB [auth AD]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
FB [auth AD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
FB [auth AD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
FB [auth AD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth AD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
FB [auth AD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GB [auth AE]IPR000529Small ribosomal subunit protein bS6Family
GB [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
GB [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
F [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
F [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
F [auth H]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
F [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
F [auth H]IPR000244Large ribosomal subunit protein bL9Family
HB [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
HB [auth AF]IPR000235Small ribosomal subunit protein uS7Family
HB [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
IB [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IB [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IB [auth AG]IPR000754Small ribosomal subunit protein uS9Family
IB [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JB [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
JB [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
JB [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
KB [auth AI]IPR001971Small ribosomal subunit protein uS11Family
KB [auth AI]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KB [auth AI]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
LB [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
LB [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
LB [auth AJ]IPR005679Ribosomal protein uS12, bacterial-typeFamily
MB [auth AK]IPR001209Small ribosomal subunit protein uS14Family
NB [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
NB [auth AL]IPR000589Small ribosomal subunit protein uS15Family
NB [auth AL]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
NB [auth AL]IPR052137Universal small ribosomal subunit uS15Family
OB [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
OB [auth AM]IPR000307Small ribosomal subunit protein bS16Family
PB [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
PB [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PB [auth AN]IPR000266Small ribosomal subunit protein uS17Family
QB [auth AO]IPR040054Small ribosomal subunit protein mS40Family
QB [auth AO]IPR001648Small ribosomal subunit protein bS18Family
QB [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
G [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
G [auth I]IPR001790Large ribosomal subunit protein uL10Family
G [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
RB [auth AP]IPR001648Small ribosomal subunit protein bS18Family
RB [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RB [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SB [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
SB [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
TB [auth AR]IPR019374Small ribosomal subunit protein mS22Family
UB [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
UB [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
VB [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
VB [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
VB [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
WB [auth AU]IPR026140Small ribosomal subunit protein mS26Family
XB [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
XB [auth AV]IPR002885Pentatricopeptide repeatRepeat
XB [auth AV]IPR019266Small ribosomal subunit protein mS27Family
XB [auth AV]IPR034913mS27/PTCD2Family
YB [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
ZB [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
ZB [auth AX]IPR019368Small ribosomal subunit protein mS29Family
ZB [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
AC [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
H [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
H [auth J]IPR000911Ribosomal protein uL11Family
H [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
H [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
H [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
H [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
BC [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
CC [auth A0]IPR032053Small ribosomal subunit protein mS34Family
DC [auth A1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
DC [auth A1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
EC [auth A2]IPR010625CHCHDomain
EC [auth A2]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
EC [auth A2]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
FC [auth A3]IPR013177Ribosomal protein mS38, C-terminalDomain
GC [auth A4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
GC [auth A4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
GC [auth A4]IPR002885Pentatricopeptide repeatRepeat
I [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth K]IPR005822Large ribosomal subunit protein uL13Family
I [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
J [auth L]PharosQ6P1L8
K [auth M]PharosQ9P015
L [auth N]PharosQ9NX20
M [auth O]PharosQ9NRX2
O [auth Q]PharosP49406
P [auth R]PharosQ9BYC9
S [auth U]PharosQ16540
T [auth V]PharosQ96A35
U [auth W]PharosQ9P0M9
W [auth Y]PharosQ9HD33
X [auth Z]PharosQ8TCC3
Y [auth 0]PharosQ9BYC8
Z [auth 1]PharosO75394
AA [auth 2]PharosQ9BQ48
BA [auth 3]PharosQ9NZE8
CA [auth 4]PharosQ9P0J6
C [auth D]PharosQ5T653
DA [auth 5]PharosQ9BZE1
FA [auth 7]PharosQ9NYK5
GA [auth 8]PharosQ9NQ50
HA [auth 9]PharosQ8IXM3
IA [auth a]PharosQ9Y6G3
JA [auth b]PharosQ8N983
KA [auth c]PharosQ9H9J2
LA [auth d]PharosQ9BRJ2
D [auth E]PharosP09001
NA [auth f]PharosQ96GC5
OA [auth g]PharosQ13405
PA [auth h]PharosQ8N5N7
QA [auth i]PharosQ4U2R6
TA [auth l]PharosQ6P161
UA [auth m]PharosQ7Z7F7
VA [auth o]PharosQ9BQC6
WA [auth p]PharosQ14197
E [auth F]PharosQ9BYD3
XA [auth q]PharosQ8TAE8
YA [auth r]PharosQ9NVS2
ZA [auth s]PharosQ9NP92
DB [auth AB]PharosQ9Y399
FB [auth AD]PharosP82675
GB [auth AE]PharosP82932
F [auth H]PharosQ9BYD2
HB [auth AF]PharosQ9Y2R9
IB [auth AG]PharosP82933
JB [auth AH]PharosP82664
KB [auth AI]PharosP82912
LB [auth AJ]PharosO15235
MB [auth AK]PharosO60783
NB [auth AL]PharosP82914
OB [auth AM]PharosQ9Y3D3
PB [auth AN]PharosQ9Y2R5
QB [auth AO]PharosQ9Y676
G [auth I]PharosQ7Z7H8
RB [auth AP]PharosQ9Y3D5
SB [auth AQ]PharosP82921
TB [auth AR]PharosP82650
UB [auth AS]PharosQ9Y3D9
VB [auth AT]PharosP82663
XB [auth AV]PharosQ92552
YB [auth AW]PharosQ9Y2Q9
ZB [auth AX]PharosP51398
AC [auth AY]PharosQ92665
H [auth J]PharosQ9Y3B7
BC [auth AZ]PharosQ9Y291
CC [auth A0]PharosP82930
DC [auth A1]PharosP82673
EC [auth A2]PharosQ96BP2
FC [auth A3]PharosQ9NWT8
GC [auth A4]PharosQ96EY7
I [auth K]PharosQ9BYD1