3J8C
Model of the human eIF3 PCI-MPN octamer docked into the 43S EM map
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2 Family | Eukaryotic translation initiation factor 3 subunit C (EIF3C) N-terminal domain-like | 8047254 | 4005530 | SCOP2 (2021-05-27) |
B [auth C] | SCOP2 Family | PCI domain (PINT motif) | 8093054 | 4000147 | SCOP2 (2021-05-27) |
B [auth C] | SCOP2 Superfamily | TPR-like | 8093044 | 3001345 | SCOP2 (2021-05-27) |
B [auth C] | SCOP2 Superfamily | Winged helix DNA-binding domain | 8093051 | 3000034 | SCOP2 (2021-05-27) |
C [auth E] | SCOP2 Family | EIF3E-like | 8044846 | 4004173 | SCOP2 (2021-05-27) |
C [auth E] | SCOP2 Family | PCI domain (PINT motif) | 8091485 | 4000147 | SCOP2 (2021-05-27) |
C [auth E] | SCOP2 Superfamily | TPR-like | 8091483 | 3001345 | SCOP2 (2021-05-27) |
C [auth E] | SCOP2 Superfamily | Winged helix DNA-binding domain | 8091486 | 3000034 | SCOP2 (2021-05-27) |
D [auth F] | SCOP2 Family | EIF3 subunit F C-terminal domain-like | 8048104 | 4005957 | SCOP2 (2021-05-27) |
D [auth F] | SCOP2 Family | JAB1/Mov34/MPN/PAD-1/JAMM domain-like | 8048970 | 4006292 | SCOP2 (2021-05-27) |
D [auth F] | SCOP2 Superfamily | EIF3 subunit F C-terminal domain-like | 8053241 | 3002167 | SCOP2 (2021-05-27) |
D [auth F] | SCOP2 Superfamily | JAB1/MPN domain-like | 8053242 | 3001105 | SCOP2 (2021-05-27) |
E [auth H] | SCOP2 Family | JAB1/Mov34/MPN/PAD-1/JAMM domain-like | 8048975 | 4006292 | SCOP2 (2021-05-27) |
E [auth H] | SCOP2 Superfamily | JAB1/MPN domain-like | 8053284 | 3001105 | SCOP2 (2021-05-27) |
F [auth K] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8002864 | 3000034 | SCOP2B (2021-05-27) |
F [auth K] | SCOP2B Superfamily | ARM repeat-like | 8002866 | 3000116 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01399 | e3j8cA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
A | PF22591 | e3j8cA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22591 | ECOD (1.6) |
B [auth C] | PF01399 | e3j8cC2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
B [auth C] | PF05470 | e3j8cC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF05470 | ECOD (1.6) |
C [auth E] | PF01399 | e3j8cE2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
C [auth E] | PF09440 | e3j8cE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF09440 | ECOD (1.6) |
D [auth F] | PF01398 | e3j8cF1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
E [auth H] | PF01398,PF19445 | e3j8cH1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398,PF19445 | ECOD (1.6) |
F [auth K] | PF10075 | e3j8cK1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF10075 | ECOD (1.6) |
F [auth K] | PF10075 | e3j8cK2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF10075 | ECOD (1.6) |
G [auth L] | PF10255 | e3j8cL2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF10255 | ECOD (1.6) |
G [auth L] | PF10255 | e3j8cL1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF10255 | ECOD (1.6) |
H [auth M] | PF01399 | e3j8cM2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
H [auth M] | F_UNCLASSIFIED | e3j8cM1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22591 | eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like) | eIF3a, PCI domain, TPR-like region | This entry represents the TPR-like region of the PCI domain of the Eukaryotic translation initiation factor 3 subunit A from Saccharomyces cerevisiae (eIF3a), the RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex ... | Domain | |
PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain | |
B [auth C] | PF05470 | Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N) | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | - | Repeat |
B [auth C] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
C [auth E] | PF09440 | eIF3 subunit 6 N terminal domain (eIF3_N) | eIF3 subunit 6 N terminal domain | This is the N terminal domain of subunit 6 translation initiation factor eIF3. | Domain |
C [auth E] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
E [auth H] | PF19445 | C-terminal region of eIF3h (eIF3h_C) | C-terminal region of eIF3h | - | Family |
F [auth K] | PF10075 | CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K) | CSN8/PSMD8/EIF3K family | - | Family |
H [auth M] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |