3HIB
Crystal structure of the second Sec63 domain of yeast Brr2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sec63_3rd | e3hibA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sec63_3rd | ECOD (1.6) |
A | Sec63_2nd_1 | e3hibA2 | A: alpha arrays | X: HhH/H2TH | H: SAM-like subdomain in Sec63-like proteins (From Topology) | T: SAM-like subdomain in Sec63-like proteins | F: Sec63_2nd_1 | ECOD (1.6) |
A | Sec63_1st | e3hibA3 | A: alpha arrays | X: Sec63 N-terminal subdomain-like (From Topology) | H: Sec63 N-terminal subdomain-like (From Topology) | T: Sec63 N-terminal subdomain-like | F: Sec63_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3380.10 | Mainly Alpha | Orthogonal Bundle | Sec63 N-terminal domain-like fold | Sec63 N-terminal domain-like domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02889 | Sec63 Brl domain (Sec63) | Sec63 Brl domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050474 | Helicase Hel308/SKI2-like | Family | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR048863 | Pre-mRNA-splicing helicase BRR2-like, plug domain | Domain | |
IPR041094 | Brr2, N-terminal helicase PWI domain | Domain | |
IPR004179 | Sec63 domain | Domain | |
IPR035892 | C2 domain superfamily | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR011545 | DEAD/DEAH box helicase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |