3HDE
Crystal structure of full-length endolysin R21 from phage 21
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phage_lysozyme_1 | e3hdeA1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_1 | ECOD (1.6) |
B | Phage_lysozyme_1 | e3hdeB1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_1 | ECOD (1.6) |
C | Phage_lysozyme_1 | e3hdeC1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_1 | ECOD (1.6) |
D | Phage_lysozyme_1 | e3hdeD1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
B | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
C | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
D | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051018 | Bacteriophage Glycosyl Hydrolase 24 | Family | |
IPR023347 | Lysozyme domain superfamily | Homologous Superfamily | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily | |
IPR043688 | SAR-endolysin-like | Family | |
IPR034690 | Endolysin T4 type | Family | |
IPR002196 | Glycoside hydrolase, family 24 | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Bitopic proteins | Lysozyme-like | Phage lysozyme |