3HD5
Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3hd5a1 | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
A | d3hd5a2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
B | d3hd5b1 | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
B | d3hd5b2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
C | d3hd5c1 | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
C | d3hd5c2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bordetella parapertussis ) [TaxId: 519 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DsbA_DsbA | e3hd5A2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
A | Thioredoxin_1 | e3hd5A3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
B | DsbA_DsbA | e3hd5B2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
B | Thioredoxin_1 | e3hd5B3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
C | DsbA_DsbA | e3hd5C2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
C | Thioredoxin_1 | e3hd5C3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00085 | Thioredoxin (Thioredoxin) | Thioredoxin | Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. | Domain | |
PF01323 | DSBA-like thioredoxin domain (DSBA) | DSBA-like thioredoxin domain | This family contains a diverse set of proteins with a thioredoxin-like structure Pfam:PF00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyse one step in prokaryotic polyaromatic hydrocarbon (PAH) cataboli ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Thiol:disulfide interchange protein dsbA | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050824 | Bacterial Thiol:disulfide Interchange Protein DsbA | Family | |
IPR023205 | Thiol:disulphide interchange protein DsbA/DsbL | Family | |
IPR001853 | DSBA-like thioredoxin domain | Domain | |
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |