3GGO
Crystal structure of prephenate dehydrogenase from A. aeolicus with HPP and NADH
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8001196 | 3000048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8001196 | 3000048 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8001196 | 3000048 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8001196 | 3000048 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PDH | e3ggoA1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
A | NAD_binding_2 | e3ggoA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
B | PDH | e3ggoB1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
B | NAD_binding_2 | e3ggoB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
D | PDH | e3ggoD1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
D | NAD_binding_2 | e3ggoD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
C | PDH | e3ggoC1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
C | NAD_binding_2 | e3ggoC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20463 | Prephenate dehydrogenase, dimerization domain (PDH_C) | Prephenate dehydrogenase, dimerization domain | Members of this family are prephenate dehydrogenases EC:1.3.1.12 (PDHs) involved in tyrosine biosynthesis [1]. This is the C-terminal, helical dimerization domain of PDHs [1]. | Domain | |
PF02153 | Prephenate dehydrogenase, nucleotide-binding domain (PDH_N) | Prephenate dehydrogenase, nucleotide-binding domain | Members of this family are prephenate dehydrogenases (PDHs) EC:1.3.1.12 involved in tyrosine biosynthesis. This is the N-terminal nucleotide-binding domain of PDHs, which has a modified Rossmann nucleotide-binding fold with an extended beta-sheet san ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR050812 | Prephenate/Arogenate Dehydrogenase | Family | |
IPR046826 | Prephenate dehydrogenase, nucleotide-binding domain | Domain | |
IPR003099 | Prephenate dehydrogenase | Domain | |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR046825 | Prephenate dehydrogenase, dimerization domain | Domain |