3F8T
Crystal structure analysis of a full-length MCM homolog from Methanopyrus kandleri
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07543 | e3f8tA2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: EUF07543 | ECOD (1.6) |
A | MCM_C | e3f8tA4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
A | MCM_N_like | e3f8tA3 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_like | ECOD (1.6) |
A | MCM_AAA | e3f8tA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.260.200 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | CATH (4.3.0) | |
A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22471 | Mcm2-like, OB fold, archaea (Mcm2-like_OB_arc) | Mcm2-like, OB fold, archaea | This entry represents the OB fold domain of a monomeric MCM homologue (known as Mcm2) from Methanopyrus kandleri [1]. This is a noncanonical domain and contains a long beta-hairpin extending from the core OB fold that is thought to mediate hexameriza ... | Domain | |
PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | - | Domain | |
PF22517 | Mcm-like, N-terminal domain, archaea (Mcm-like_N) | Mcm-like, N-terminal domain, archaea | This entry represents the N-terminal domain of a monomeric MCM homologue (known as Mcm2) from Methanopyrus kandleri [1]. The MCM (minichromosome maintenance) proteins, which belong to the AAA superfamily, serve as the replicative helicase in eukaryot ... | Domain | |
PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031327 | Mini-chromosome maintenance protein | Family | |
IPR001208 | MCM domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR041562 | MCM, AAA-lid domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |