Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22408e3es5A1 A: alpha complex topologyX: PsV capsid protein (From Topology)H: PsV capsid protein (From Topology)T: PsV capsid proteinF: PF22408ECOD (1.6)
BPF22408e3es5B1 A: alpha complex topologyX: PsV capsid protein (From Topology)H: PsV capsid protein (From Topology)T: PsV capsid proteinF: PF22408ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.272.60 Mainly Alpha Up-down Bundle Zinc Finger, Delta Prime domain 3CATH (4.3.0)
B1.20.272.60 Mainly Alpha Up-down Bundle Zinc Finger, Delta Prime domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF22408PsV, capsid protein, C-terminal domain (PsV_CP_C)PsV, capsid protein, C-terminal domainThis domain is found at the C-terminal end of the putative capsid protein from Penicillium stoloniferum virus F (CP, Swiss:Q4G3H1). This protein has a disordered N-terminal end that interacts with the dsRNA genome and probably participates in its pac ...This domain is found at the C-terminal end of the putative capsid protein from Penicillium stoloniferum virus F (CP, Swiss:Q4G3H1). This protein has a disordered N-terminal end that interacts with the dsRNA genome and probably participates in its packaging or transcription, and a C-terminal domain (this entry) that shows a helix-loop-helix motif involved in the formation flexible channels thought to be involved in RNA synthesis activity [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Putative capsid protein - -