HIV-1 capsid C-terminal domain mutant (Y169A) in complex with an inhibitor of particle assembly (CAI)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth B] | Lipocalin | e3ds3B1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Lipocalin | ECOD (v295.2) |
| A | Lipocalin | e3ds3A1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Lipocalin | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth B] | 1.10.1200.30 | Mainly Alpha | Orthogonal Bundle | Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein | Chain A | CATH (4.3.0) |
| A | 1.10.1200.30 | Mainly Alpha | Orthogonal Bundle | Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein | Chain A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, C [auth B] | IPR000071 | Immunodeficiency lentiviral matrix, N-terminal | Domain |
| A, C [auth B] | IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain |
| A, C [auth B] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
| A, C [auth B] | IPR050195 | Primate lentivirus group Gag polyprotein-like | Domain |
| A, C [auth B] | IPR001878 | Zinc finger, CCHC-type | Domain |
| A, C [auth B] | IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
| A, C [auth B] | IPR010999 | Retroviral matrix protein | Homologous Superfamily |
| A, C [auth B] | IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily |
| A, C [auth B] | IPR014817 | Gag protein p6 | Domain |
| A, C [auth B] | IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |