3DLV
Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d3dlvb1 | Alpha and beta proteins (a+b) | SRP19 | SRP19 | automated matches | automated matches | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
A [auth B] | d3dlvb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
B [auth A] | d3dlva_ | Alpha and beta proteins (a+b) | SRP19 | SRP19 | automated matches | automated matches | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF01922 | e3dlvB1 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: PF01922 | ECOD (1.6) |
B [auth A] | PF01922 | e3dlvA1 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: PF01922 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.30.56.30 | Alpha Beta | 2-Layer Sandwich | Phenylalanyl-tRNA Synthetase | Chain B, domain 1 | CATH (4.3.0) |
B [auth A] | 3.30.56.30 | Alpha Beta | 2-Layer Sandwich | Phenylalanyl-tRNA Synthetase | Chain B, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF01922 | SRP19 protein (SRP19) | SRP19 protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR002778 | Signal recognition particle, SRP19 subunit | Family |
A [auth B], B [auth A] | IPR022938 | Signal recognition particle, SRP19 subunit, archaeal-type | Family |
A [auth B], B [auth A] | IPR036521 | Signal recognition particle, subunit SRP19-like superfamily | Homologous Superfamily |