3DKS
DsbA substrate complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dksa_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Shigella flexneri ) [TaxId: 623 ], | SCOPe (2.08) |
B | d3dksb_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Shigella flexneri ) [TaxId: 623 ], | SCOPe (2.08) |
C | d3dksc_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Shigella flexneri ) [TaxId: 623 ], | SCOPe (2.08) |
D | d3dksd_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Shigella flexneri ) [TaxId: 623 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DsbA_DsbA | e3dksA2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
A | Thioredoxin_1 | e3dksA3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
B | DsbA_DsbA | e3dksB2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
B | Thioredoxin_1 | e3dksB3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
C | DsbA_DsbA | e3dksC2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
C | Thioredoxin_1 | e3dksC3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
D | DsbA_DsbA | e3dksD2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
D | Thioredoxin_1 | e3dksD3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
D | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01323 | DSBA-like thioredoxin domain (DSBA) | DSBA-like thioredoxin domain | This family contains a diverse set of proteins with a thioredoxin-like structure Pfam:PF00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyse one step in prokaryotic polyaromatic hydrocarbon (PAH) cataboli ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Thiol:disulfide interchange protein dsbA | - | |||
siga peptide | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050824 | Bacterial Thiol:disulfide Interchange Protein DsbA | Family | |
IPR023205 | Thiol:disulphide interchange protein DsbA/DsbL | Family | |
IPR001853 | DSBA-like thioredoxin domain | Domain | |
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | :  |
HSE | Parent Component: SER :  AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 |